RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 INPP5KQ9BT40 448 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 TBL1XR1Q9BZK7 514 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 HOXD1Q9GZZ0 328 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 OR51I1Q9H343 314 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 IL1RL2Q9HB29 575 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 CACYBPQ9HB71 228 aaKnown RBP12.95□□□□□ -0.34
SSBP3-208ENST00000444533 ASF1BQ9NVP2 202 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-208ENST00000444533 ABCG2Q9UNQ0 655 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 A0A096LPI6 279 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 GXYLT2A0PJZ3 443 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 ASPDHA6ND91 283 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 BBIP1A8MTZ0 92 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 EVPLLA8MZ36 301 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 H3BNH8 94 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 SCDO00767 359 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 SNX3O60493 162 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 TSPAN2O60636 221 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 KCNK2O95069 426 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 DRD4P21917 467 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 EVI2BP34910 448 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 GCKP35557 465 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 CASP3P42574 277 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 CRATP43155 626 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 DNASE1L1P49184 302 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 RPS26P62854 115 aaKnown RBP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 PPIAP62937 165 aaKnown RBP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 RBPJQ06330 500 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 STX5Q13190 355 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 GNA13Q14344 377 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 KRTCAP3Q53RY4 240 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 DCST2Q5T1A1 773 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 TNFAIP8L2Q6P589 184 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 TMEM81Q6P7N7 255 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 FIGNL1Q6PIW4 674 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 SLC2A7Q6PXP3 512 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 BNC2Q6ZN30 1099 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 RNF130Q86XS8 419 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 FUNDC1Q8IVP5 155 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 CLEC4FQ8N1N0 589 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 ZFP62Q8NB50 900 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 PCYOX1LQ8NBM8 494 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 OR1J4Q8NGS1 313 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 MIPOL1Q8TD10 442 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 NR4A3Q92570 626 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 GTF2H4Q92759 462 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 HOXB13Q92826 284 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 HGDQ93099 445 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 OTUB1Q96FW1 271 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 FRMD6Q96NE9 622 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 ANGPTL4Q9BY76 406 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 SH2D2AQ9NP31 389 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 ZFP64Q9NPA5 681 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 SAR1AQ9NR31 198 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 CNOT11Q9UKZ1 510 aaKnown RBP12.94□□□□□ -0.34
SSBP3-208ENST00000444533 LIPT1Q9Y234 373 aa12.94□□□□□ -0.34
SSBP3-208ENST00000444533 STX11O75558 287 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 UTS2O95399 124 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 CYP4B1P13584 511 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 CAPN3P20807 821 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 ENDOUP21128 410 aaKnown RBP12.93□□□□□ -0.34
SSBP3-208ENST00000444533 MAP3K8P41279 467 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 CDKN2CP42773 168 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 ZFP36L2P47974 494 aaKnown RBP12.93□□□□□ -0.34
SSBP3-208ENST00000444533 PMP22Q01453 160 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 KLF10Q13118 480 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 NFYCQ13952 458 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 CYLC2Q14093 348 aaPredicted RBP12.93□□□□□ -0.34
SSBP3-208ENST00000444533 TOMM20Q15388 145 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 FLYWCH1Q4VC44 716 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 GPAT3Q53EU6 434 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 GKAP1Q5VSY0 366 aaPredicted RBP12.93□□□□□ -0.34
SSBP3-208ENST00000444533 OR5D16Q8NGK9 328 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 PNPT1Q8TCS8 783 aaKnown RBP12.93□□□□□ -0.34
SSBP3-208ENST00000444533 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 ZNF385DQ9H6B1 395 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 EXO5Q9H790 373 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 TPT1P8Q9HAU6 139 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 SERHLQ9NQF3 203 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 UBQLN4Q9NRR5 601 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 CALML5Q9NZT1 146 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 SEC14L3Q9UDX4 400 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 ARL2BPQ9Y2Y0 163 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 PCDHB14Q9Y5E9 798 aa12.93□□□□□ -0.34
SSBP3-208ENST00000444533 NPIPA5E9PKD4 350 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 CLIC1O00299 241 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 ICOSLGO75144 302 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 DCTN3O75935 186 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 OR12D1P0DN82 309 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 NR2F1P10589 423 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 EDN3P14138 238 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 GDF1P27539 372 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 RFC3P40938 356 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 CASP9P55211 416 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 FADDQ13158 208 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 UBAP2LQ14157 1087 aaKnown RBP12.92□□□□□ -0.34
SSBP3-208ENST00000444533 ARHGAP11BQ3KRB8 267 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 PRR30Q53SZ7 412 aaPredicted RBP12.92□□□□□ -0.34
SSBP3-208ENST00000444533 MTDHQ86UE4 582 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms