RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 OR7D2Q96RA2 312 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 GPER1Q99527 375 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 NUAK2Q9H093 628 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 KLHL31Q9H511 634 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 SMURF2Q9HAU4 748 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 TRAPPC13A5PLN9 417 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 H0YIG0 161 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 FAAHO00519 579 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 PRKRAO75569 313 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 OR5F1O95221 314 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 PEPDP12955 493 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 SLC9A3P48764 834 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 HSF2Q03933 536 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 GFOD2Q3B7J2 385 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 CCNJQ5T5M9 372 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 OR2T11Q8NH01 316 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 TP53INP1Q96A56 240 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 DDIT4LQ96D03 193 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 SSR3Q9UNL2 185 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 FARSAQ9Y285 508 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 RPL36Q9Y3U8 105 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 DAPL1A0PJW8 107 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 WASHC1A8K0Z3 465 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 GALR3O60755 368 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 ABCB7O75027 752 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 CELA2BP08218 269 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 ALDOCP09972 364 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 PABPC4LP0CB38 370 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 SFTPDP35247 375 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 CLRN1P58418 232 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 TPRG1LQ5T0D9 272 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 KBTBD2Q8IY47 623 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 MEN1O00255 615 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 LCMT2O60294 686 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 HSD17B1P14061 328 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 SLC6A9P48067 706 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 TUBA4AP68366 448 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 ELAVL1Q15717 326 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 ATG14Q6ZNE5 492 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 AKAP14Q86UN6 197 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 EGFL6Q8IUX8 553 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 C1GALT1C1Q96EU7 318 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 HSPBAP1Q96EW2 488 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 SENP5Q96HI0 755 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 C20orf27Q9GZN8 174 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 THSD7BQ9C0I4 1608 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 PAPLNO95428 1278 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 PLP2Q04941 152 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 FAM53BQ14153 422 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 MFSD13AQ14CX5 517 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 VWA2Q5GFL6 755 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 MZT2BQ6NZ67 158 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 RPS19BP1Q86WX3 136 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 LAS2Q8IYD9 372 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 POC5Q8NA72 575 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 NLGN4YQ8NFZ3 816 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 FANK1Q8TC84 345 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 TMEM185BQ9H7F4 350 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 TPD52L2O43399 206 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 TSPAN12O95859 305 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 IGHV4-34P06331 123 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 HK1P19367 917 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 VEZF1Q14119 521 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 MYBPC3Q14896 1274 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 MAMDC2Q7Z304 686 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 OR8J2Q8NGG1 315 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 EP400Q96L91 3159 aa13.21□□□□□ -0.29
SMARCA4-204ENST00000444061 NME4O00746 187 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 GGT1P19440 569 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 PRKACGP22612 351 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 LTB4RQ15722 352 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 RUNDC3AQ59EK9 446 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 CPZQ66K79 652 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 GTF2IRD2BQ6EKJ0 949 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 CDH24Q86UP0 819 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 GTF2IRD2Q86UP8 949 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF547Q8IVP9 402 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 MINDY2Q8NBR6 621 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 LCORQ96JN0 433 aaPredicted RBP13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 CCDC115Q96NT0 180 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 GUCD1Q96NT3 240 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 EP300Q09472 2414 aaPredicted RBP13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 SAGE2PA6NJ88 616 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 H3BML4 177 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 PCGF2P35227 344 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF84P51523 738 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 CBFBQ13951 182 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 ZADH2Q8N4Q0 377 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 TMEM178AQ8NBL3 297 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 DNAJA4Q8WW22 397 aaPredicted RBP13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 COMMD4Q9H0A8 199 aa13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 MOV10Q9HCE1 1003 aaKnown RBP13.21□□□□□ -0.3
SMARCA4-204ENST00000444061 IGHV3-20A0A0C4DH32 117 aa13.2□□□□□ -0.3
SMARCA4-204ENST00000444061 ARGFXA6NJG6 315 aa13.2□□□□□ -0.3
SMARCA4-204ENST00000444061 ANKRD28O15084 1053 aa13.2□□□□□ -0.3
SMARCA4-204ENST00000444061 SP9P0CG40 484 aa13.2□□□□□ -0.3
SMARCA4-204ENST00000444061 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms