RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 FRMD7Q6ZUT3 714 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 IKBIPQ70UQ0 350 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 TGIF2LYQ8IUE0 185 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 UBQLNLQ8IYU4 475 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 LINC01560Q8TB33 94 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 UCN2Q96RP3 112 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 IQCGQ9H095 443 aaKnown RBP10.68□□□□□ -0.7
TTC28-203ENST00000442232 CXXC4Q9H2H0 198 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 PPCSQ9HAB8 311 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 HHATLQ9HCP6 504 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 MYNNQ9NPC7 610 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 GALNT8Q9NY28 637 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 JKAMPQ9P055 326 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 CLCF1Q9UBD9 225 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 NDRG3Q9UGV2 375 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 MID2Q9UJV3 735 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 EIF3LQ9Y262 564 aaKnown RBP10.68□□□□□ -0.7
TTC28-203ENST00000442232 WBP11Q9Y2W2 641 aaKnown RBP10.68□□□□□ -0.7
TTC28-203ENST00000442232 MTORP42345 2549 aa10.68□□□□□ -0.7
TTC28-203ENST00000442232 HRNRQ86YZ3 2850 aaPredicted RBP10.67□□□□□ -0.7
TTC28-203ENST00000442232 SH3D21A4FU49 640 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 SLC22A20A6NK97 555 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 TTC36A6NLP5 189 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 PDPK1O15530 556 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 DIAPH2O60879 1101 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 NME6O75414 186 aaPredicted RBP10.67□□□□□ -0.7
TTC28-203ENST00000442232 SMNDC1O75940 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
TTC28-203ENST00000442232 KCNH1O95259 989 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 CHEK2O96017 543 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 CRHP06850 196 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 UROSP10746 265 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 ZNF708P17019 499 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 GPC1P35052 558 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 SLCO1A2P46721 670 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 RFX3P48380 749 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 FOXF2Q12947 444 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 BCL2A1Q16548 175 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 VPS26BQ4G0F5 336 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 ADGRE4PQ86SQ3 457 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 CNEP1R1Q8N9A8 125 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 ZFP28Q8NHY6 868 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 UBLCP1Q8WVY7 318 aaPredicted RBP10.67□□□□□ -0.7
TTC28-203ENST00000442232 DACH2Q96NX9 599 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 TBL1XR1Q9BZK7 514 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 LIME1Q9H400 295 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 DSN1Q9H410 356 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 FAM120CQ9NX05 1096 aaKnown RBP10.67□□□□□ -0.7
TTC28-203ENST00000442232 STOML1Q9UBI4 398 aa10.67□□□□□ -0.7
TTC28-203ENST00000442232 C19orf53Q9UNZ5 99 aaPredicted RBP10.67□□□□□ -0.7
TTC28-203ENST00000442232 PRRC2AP48634 2157 aaKnown RBP10.67□□□□□ -0.7
TTC28-203ENST00000442232 A0A1W2PNV4 684 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 G3V2L1 256 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 LINC01387J3KSC0 135 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 COPEO14579 308 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 RGS14O43566 566 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 HCRTR2O43614 444 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 SEC22BO75396 215 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 PROCP04070 461 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 NEFHP12036 1026 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 DDX5P17844 614 aaKnown RBP10.66□□□□□ -0.7
TTC28-203ENST00000442232 KLK2P20151 261 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 FOXA1P55317 472 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 CLDN18P56856 261 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 DNAJB13P59910 316 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 RPS3AP61247 264 aaKnown RBP10.66□□□□□ -0.7
TTC28-203ENST00000442232 PSG6Q00889 435 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 FGFBP1Q14512 234 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 FAM153CQ494X1 144 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 FAM71E1Q6IPT2 247 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 NOXRED1Q6NXP6 359 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 SZRD1Q7Z422 152 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 HOMEZQ8IX15 550 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 OR4N2Q8NGD1 307 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 GFM2Q969S9 779 aaKnown RBP10.66□□□□□ -0.7
TTC28-203ENST00000442232 MBD6Q96DN6 1003 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 C11orf24Q96F05 449 aaPredicted RBP10.66□□□□□ -0.7
TTC28-203ENST00000442232 METTL2AQ96IZ6 378 aaKnown RBP10.66□□□□□ -0.7
TTC28-203ENST00000442232 FAM111AQ96PZ2 611 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 PIGQQ9BRB3 760 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 TMUB1Q9BVT8 246 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 GLIPR2Q9H4G4 154 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 EQTNQ9NQ60 294 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 EMCNQ9ULC0 261 aa10.66□□□□□ -0.7
TTC28-203ENST00000442232 MAP1AP78559 2803 aaPredicted RBP10.66□□□□□ -0.7
TTC28-203ENST00000442232 SMIM23A6NLE4 172 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 H3BML4 177 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 SLC28A1O00337 649 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 UBFD1O14562 309 aaKnown RBP10.65□□□□□ -0.7
TTC28-203ENST00000442232 MSTNO14793 375 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 SEC14L5O43304 696 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 ZIC3O60481 467 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 PLIN3O60664 434 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 IL33O95760 270 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 IFI6P09912 130 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 FCGR2AP12318 317 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 CPA3P15088 417 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 GAS1P54826 345 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 SIRPAP78324 504 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 HSPB3Q12988 150 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms