RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 FAM110DQ8TAY7 271 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 C18orf25Q96B23 403 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 MECRQ9BV79 373 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 TMEM38AQ9H6F2 299 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 KRCC1Q9NPI7 259 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 ERVK13-1Q9NX77 482 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 MAT2BQ9NZL9 334 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 PPP4R1LQ9P1A2 415 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 PRSS38A1L453 326 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 C7orf72A4D263 438 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 DLEU1O43261 78 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 UBOX5O94941 541 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 SEC24AO95486 1093 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 IFNA5P01569 189 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 HOXC6P09630 235 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 MAPTP10636 758 aaKnown RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 GNAZP19086 355 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 NME2P22392 152 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 AZGP1P25311 298 aaKnown RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 NOVP48745 357 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 C4orf17Q53FE4 359 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 PTCRAQ6ISU1 281 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 DLEU7Q6UYE1 221 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 CERS5Q8N5B7 392 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 UBTD2Q8WUN7 234 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 SFXN2Q96NB2 322 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 CPNE1Q99829 537 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 ERVK-6Q9BXR3 956 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 BHLHE41Q9C0J9 482 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 SGK2Q9HBY8 427 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 TMPRSS4Q9NRS4 437 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 WASF3Q9UPY6 502 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 SMCHD1A6NHR9 2005 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 NUAK1O60285 661 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 TJP3O95049 919 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 HOXD4P09016 255 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 CD247P20963 164 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 ELAVL4P26378 380 aaKnown RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 NDST1P52848 882 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 TTLL4Q14679 1199 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 RNASEKQ6P5S7 137 aaKnown RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 BTNL3Q6UXE8 466 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 LRRC55Q6ZSA7 311 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 RIBC1Q8N443 379 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 FAM71CQ8NEG0 241 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 PIK3R3Q92569 461 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 KLHL29Q96CT2 875 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 SNRNP40Q96DI7 357 aaKnown RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 SERPINB11Q96P15 392 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 PCGF1Q9BSM1 259 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 KLHL31Q9H511 634 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 TMEM231Q9H6L2 316 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 MYNNQ9NPC7 610 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 NIT2Q9NQR4 276 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 CATSPERZQ9NTU4 200 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 GSKIPQ9P0R6 139 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 PAK5Q9P286 719 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 DNAJC12Q9UKB3 198 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 RPL26L1Q9UNX3 145 aaKnown RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 FLVCR2Q9UPI3 526 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 GSTK1Q9Y2Q3 226 aa9.86□□□□□ -0.83
SYNE2-206ENST00000441438 POLR2AP24928 1970 aaKnown RBP9.86□□□□□ -0.83
SYNE2-206ENST00000441438 PRR19A6NJB7 356 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 FAM90A8PA6NJQ4 464 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SPATA31C2B4DYI2 1134 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 PPP1R11O60927 126 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SCO1O75880 301 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 OR4F21O95013 312 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SLC34A2O95436 690 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 TRUB2O95900 331 aaKnown RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 IL2RAP01589 272 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 F7P08709 466 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 FAM90A13PP0C7W8 464 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 FAM90A24PP0C7X0 464 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 ZNF28P17035 718 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 NPR2P20594 1047 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 ZP3P21754 424 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 FOXN2P32314 431 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 CSF2RBP32927 897 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 CHI3L1P36222 383 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 RGRP47804 291 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 BLKP51451 505 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 HERVK_113P63132 956 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SHC2P98077 582 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 CSTF1Q05048 431 aaKnown RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 PPP1R8Q12972 351 aaKnown RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 KPNB1Q14974 876 aaKnown RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 DGAT2L7PQ6IED9 249 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SHISA5Q8N114 240 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 CENPSQ8N2Z9 138 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 GTPBP3Q969Y2 492 aaKnown RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 L3HYPDHQ96EM0 354 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 PGAM5Q96HS1 289 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 SPATA33Q96N06 139 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 RAB40CQ96S21 281 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 ATXN3LQ9H3M9 355 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 HEYLQ9NQ87 328 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 PHF11Q9UIL8 331 aa9.85□□□□□ -0.83
SYNE2-206ENST00000441438 UTP11Q9Y3A2 253 aaKnown RBP9.85□□□□□ -0.83
SYNE2-206ENST00000441438 MYH4Q9Y623 1939 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms