RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 ASNA1O43681 348 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 HNRNPCL4P0DMR1 293 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 HSD17B7P56937 341 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 MAD2L1BPQ15013 274 aaPredicted RBP19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 ISXQ2M1V0 245 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 DHRS13Q6UX07 377 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 DEPDC4Q8N2C3 294 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 IPCEF1Q8WWN9 437 aaPredicted RBP19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 ALPK1Q96QP1 1244 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 SLC39A1Q9NY26 324 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 KCND3Q9UK17 655 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 LIPT1Q9Y234 373 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 PCDHGB1Q9Y5G3 927 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 B4E171 279 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 SEC14L2O76054 403 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 OXSR1O95747 527 aaPredicted RBP19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 MT-CO3P00414 261 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 PTGER1P34995 402 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 TSPAN7P41732 249 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 LIMS1P48059 325 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 TMBIM6P55061 237 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 GPR107Q5VW38 600 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 CDCP2Q5VXM1 449 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 LAIR2Q6ISS4 152 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 RBM18Q96H35 190 aaKnown RBP19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 DOK1Q99704 481 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 SERHL2Q9H4I8 314 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 TRIM45Q9H8W5 580 aaPredicted RBP19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 TIMMDC1Q9NPL8 285 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 SLC9A8Q9Y2E8 581 aa19.97■□□□□ 0.79
CDKN1C-204ENST00000440480 DUXAA6NLW8 204 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 E9PQ18 207 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 AGR2O95994 175 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 ATP1B1P05026 303 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 HMGN2P05204 90 aaKnown RBP19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 SLC35E2P0CK97 266 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 BTG2P78543 158 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 DCDP81605 110 aaKnown RBP19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 PUM1Q14671 1186 aaKnown RBP eCLIP19.96■□□□□ 0.792e-7■■■□□ 17
CDKN1C-204ENST00000440480 SYPL1Q16563 259 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 CYP27C1Q4G0S4 372 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 TMEM107Q6UX40 140 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 P3H2Q8IVL5 708 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 PARP8Q8N3A8 854 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 SVOPQ8N4V2 548 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 NUP43Q8NFH3 380 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 APOBEC4Q8WW27 367 aaKnown RBP19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 C12orf43Q96C57 262 aaKnown RBP19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 ELP4Q96EB1 424 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 CCDC90BQ9GZT6 254 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 LOXL2Q9Y4K0 774 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 ZNF292O60281 2723 aa19.96■□□□□ 0.79
CDKN1C-204ENST00000440480 OR2W5A6NFC9 320 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 J3KTA2 159 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 ITIH1P19827 911 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 GGT2P36268 569 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 LIMK1P53667 647 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 CLDN6P56747 220 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 LASP1Q14847 261 aaKnown RBP19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 MAPK11Q15759 364 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 NKAIN1Q4KMZ8 207 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 ATAD3BQ5T9A4 648 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 MFSD4BQ5TF39 518 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 XAF1Q6GPH4 301 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 MED25Q71SY5 747 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 RAB11FIP2Q7L804 512 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 OR5D16Q8NGK9 328 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 ALOXE3Q9BYJ1 711 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 DUSP21Q9H596 190 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 MKKSQ9NPJ1 570 aaPredicted RBP19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 OR10H2O60403 315 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 FAM20BO75063 409 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 CPNE3O75131 537 aaKnown RBP19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 CSO75390 466 aaKnown RBP19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 TEKQ02763 1124 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 GANABQ14697 944 aaKnown RBP19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 LTB4RQ15722 352 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 MINDY4Q4G0A6 757 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 VWA2Q5GFL6 755 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 SLCO6A1Q86UG4 719 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 GPR32P1Q8NGA4 272 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 KAT2AQ92830 837 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 DEPDC7Q96QD5 511 aa19.95■□□□□ 0.78
CDKN1C-204ENST00000440480 MAOAP21397 527 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 NT5EP21589 574 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 FMO3P31513 532 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 MC3RP41968 323 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 MVKQ03426 396 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 BIKQ13323 160 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 GPAT3Q53EU6 434 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 DCST1Q5T197 706 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 DCAF12Q5T6F0 453 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 LINC00471Q8N535 108 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 ZNF540Q8NDQ6 660 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 NR4A3Q92570 626 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 LIN37Q96GY3 246 aaPredicted RBP19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 PTCHD1Q96NR3 888 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 ACTRT3Q9BYD9 372 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 LANCL2Q9NS86 450 aa19.94■□□□□ 0.78
CDKN1C-204ENST00000440480 PCDHGA6Q9Y5G7 932 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms