RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CELSR3Q9NYQ7 3312 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 LOC105371267A0A1B0GV96 52 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 A0A1W2PPC4 97 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 ZSCAN5BA6NJL1 495 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 M0R129 80 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 MAOBP27338 520 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 HTR2BP41595 481 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 TSFMP43897 325 aaKnown RBP13.27□□□□□ -0.28
LIMD1-202ENST00000440097 SNRPNP63162 240 aaKnown RBP13.27□□□□□ -0.28
LIMD1-202ENST00000440097 PRR5P85299 388 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 DUSP2Q05923 314 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 MLC1Q15049 377 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 MLIPQ5VWP3 458 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 PARGQ86W56 976 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 OOSP2Q86WS3 158 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 KRT73Q86Y46 540 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 OR4N5Q8IXE1 308 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 TMEFF1Q8IYR6 380 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 OR9Q2Q8NGE9 314 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 GPR151Q8TDV0 419 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 UTP15Q8TED0 518 aaKnown RBP13.27□□□□□ -0.28
LIMD1-202ENST00000440097 SLC7A6Q92536 515 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 ZNF764Q96H86 408 aaPredicted RBP13.27□□□□□ -0.28
LIMD1-202ENST00000440097 OR2A5Q96R48 311 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 OR5M11Q96RB7 305 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 ZFYVE21Q9BQ24 234 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 CCDC3Q9BQI4 270 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 RLIMQ9NVW2 624 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 LYARQ9NX58 379 aaKnown RBP13.27□□□□□ -0.28
LIMD1-202ENST00000440097 ZSCAN32Q9NX65 697 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 FBXL21Q9UKT6 434 aa13.27□□□□□ -0.28
LIMD1-202ENST00000440097 SCN2AQ99250 2005 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 AGRPO00253 132 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 IL7P13232 177 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 KHKP50053 298 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 ANXA11P50995 505 aaKnown RBP13.27□□□□□ -0.29
LIMD1-202ENST00000440097 BLKP51451 505 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 C19orf57Q0VDD7 668 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 LTB4RQ15722 352 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF605Q86T29 641 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 CAMKVQ8NCB2 501 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 SUN3Q8TAQ9 357 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 GTPBP3Q969Y2 492 aaKnown RBP13.27□□□□□ -0.29
LIMD1-202ENST00000440097 SLC2A4RGQ9NR83 387 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 THSD1Q9NS62 852 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 ACOXLQ9NUZ1 547 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF226Q9NYT6 803 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 ENPP4Q9Y6X5 453 aa13.27□□□□□ -0.29
LIMD1-202ENST00000440097 KIR2DS5A0A0G2JLQ3 304 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 A0A0G2JNG1 304 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 A0A0X1KG70 313 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 KIR2DS3K7RE56 304 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 B3GALT2O43825 422 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 PPP1CAP62136 330 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 SIM1P81133 766 aaPredicted RBP13.26□□□□□ -0.29
LIMD1-202ENST00000440097 CD83Q01151 205 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 GAS6Q14393 721 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 KIR2DS5Q14953 304 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 MED22Q15528 200 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 FCRL6Q6DN72 434 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 PEX5LQ8IYB4 626 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ELMOD2Q8IZ81 293 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 SLC38A6Q8IZM9 456 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 DEPDC4Q8N2C3 294 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 FLVCR1-AS1Q8TAF5 88 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ZDHHC1Q8WTX9 485 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ASB15Q8WXK1 588 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 C16orf58Q96GQ5 468 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ARPC5LQ9BPX5 153 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 PRRG3Q9BZD7 231 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 FOXQ1Q9C009 403 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 C3orf14Q9HBI5 128 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 CLCA2Q9UQC9 943 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 V9GYH0 126 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 A0A075B6Q4 140 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 A0A1W2PQ09 198 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 OR5K4A6NMS3 321 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 H0YGG7 62 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 PCDH17O14917 1159 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF217O75362 1048 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 FHP07954 510 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 TRAPPC2P0DI81 140 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 TRAPPC2BP0DI82 140 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 NAT1P18440 290 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 POU3F3P20264 500 aaPredicted RBP13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF10P21506 573 aaPredicted RBP13.26□□□□□ -0.29
LIMD1-202ENST00000440097 TLX1P31314 330 aaPredicted RBP13.26□□□□□ -0.29
LIMD1-202ENST00000440097 IFNA8P32881 189 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ARF3P61204 181 aaPredicted RBP13.26□□□□□ -0.29
LIMD1-202ENST00000440097 DAB2P98082 770 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ID2Q02363 134 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ABHD13Q7L211 337 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 WDR53Q7Z5U6 358 aaPredicted RBP13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ANGPTL6Q8NI99 470 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 TIGARQ9NQ88 270 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 STARD5Q9NSY2 213 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 CPNE3O75131 537 aaKnown RBP13.26□□□□□ -0.29
LIMD1-202ENST00000440097 ADRA2AP08913 450 aa13.26□□□□□ -0.29
LIMD1-202ENST00000440097 RHCEP18577 417 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms