RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SDHDO14521 159 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 NKX2-2O95096 273 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 IL33O95760 270 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 C6orf47O95873 294 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 OCRLQ01968 901 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 TOMM20Q15388 145 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 TTMPQ5BVD1 217 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 XKRXQ6PP77 449 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 CAMKMTQ7Z624 323 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 MARVELD2Q8N4S9 558 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 GPR151Q8TDV0 419 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 PIK3R3Q92569 461 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 DUSP26Q9BV47 211 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 SERHLQ9NQF3 203 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 MRTO4Q9UKD2 239 aaKnown RBP21.57■■□□□ 1.04
VARS-217ENST00000440048 WIF1Q9Y5W5 379 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 SNX8Q9Y5X2 465 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 MED12Q93074 2177 aa21.57■■□□□ 1.04
VARS-217ENST00000440048 CACNA1CQ13936 2221 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 HDAC3O15379 428 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 KITP10721 976 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 ACP2P11117 423 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 AGAP20933 346 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 GAS1P54826 345 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 PRR5P85299 388 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 ART3Q13508 389 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 PGS1Q32NB8 556 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 LSM12Q3MHD2 195 aaKnown RBP21.56■■□□□ 1.04
VARS-217ENST00000440048 VPS26BQ4G0F5 336 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 WLSQ5T9L3 541 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 MFSD12Q6NUT3 480 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 ZNF585AQ6P3V2 769 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 WDR75Q8IWA0 830 aaKnown RBP21.56■■□□□ 1.04
VARS-217ENST00000440048 RPRMLQ8N4K4 120 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 PSMA8Q8TAA3 256 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 FBXO30Q8TB52 745 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 SLC9A6Q92581 669 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 C16orf58Q96GQ5 468 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 SH3GL2Q99962 352 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 DPY30Q9C005 99 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 CXorf36Q9H7Y0 433 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 ZCCHC3Q9NUD5 404 aaKnown RBP21.56■■□□□ 1.04
VARS-217ENST00000440048 FLRT3Q9NZU0 649 aa21.56■■□□□ 1.04
VARS-217ENST00000440048 FADS1O60427 444 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 IGKV1D-16P01601 117 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 ACVR2AP27037 513 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 EVI2BP34910 448 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 RFX3P48380 749 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 EIPR1Q53HC9 387 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 TMEM211Q6ICI0 200 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 OGFOD2Q6N063 350 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 ZCCHC12Q6PEW1 402 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 PLCZ1Q86YW0 608 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 SLC16A11Q8NCK7 471 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 ZNF75CPQ92670 426 aaPredicted RBP21.55■■□□□ 1.04
VARS-217ENST00000440048 RMND5BQ96G75 393 aaPredicted RBP21.55■■□□□ 1.04
VARS-217ENST00000440048 YIPF4Q9BSR8 244 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 VIPAS39Q9H9C1 493 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 SLC6A5Q9Y345 797 aa21.55■■□□□ 1.04
VARS-217ENST00000440048 CREBBPQ92793 2442 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 C15orf38-AP3S2A0A0A6YYH1 394 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 TRPC5OSA6NMA1 111 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 FIGNL2A6NMB9 653 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 SLCO1B7G3V0H7 640 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 KLF11O14901 512 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 ANKRD28O15084 1053 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 CBR3O75828 277 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 KCNH1O95259 989 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 CCT3P49368 545 aaKnown RBP21.54■■□□□ 1.04
VARS-217ENST00000440048 PRIM2P49643 509 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 PSMD4P55036 377 aaKnown RBP21.54■■□□□ 1.04
VARS-217ENST00000440048 CDSNQ15517 529 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 DUSP5Q16690 384 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 WIPI1Q5MNZ9 446 aaPredicted RBP21.54■■□□□ 1.04
VARS-217ENST00000440048 EXOSC6Q5RKV6 272 aaKnown RBP21.54■■□□□ 1.04
VARS-217ENST00000440048 OR5M10Q6IEU7 315 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 YRDCQ86U90 279 aaKnown RBP21.54■■□□□ 1.04
VARS-217ENST00000440048 FAM83FQ8NEG4 500 aaPredicted RBP21.54■■□□□ 1.04
VARS-217ENST00000440048 OTUB1Q96FW1 271 aaPredicted RBP21.54■■□□□ 1.04
VARS-217ENST00000440048 WDR55Q9H6Y2 383 aaPredicted RBP21.54■■□□□ 1.04
VARS-217ENST00000440048 ABCG2Q9UNQ0 655 aa21.54■■□□□ 1.04
VARS-217ENST00000440048 C17orf51A8MQB3 221 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 PRSS44E7EML9 344 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 CFLARO15519 480 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 SCO2O43819 266 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 WDR1O75083 606 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 HMGN2P05204 90 aaKnown RBP21.53■■□□□ 1.04
VARS-217ENST00000440048 ALOX5P09917 674 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 ALDOCP09972 364 aaKnown RBP21.53■■□□□ 1.04
VARS-217ENST00000440048 EPHA3P29320 983 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 WNT3P56703 355 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 CRYZQ08257 329 aaKnown RBP21.53■■□□□ 1.04
VARS-217ENST00000440048 LASP1Q14847 261 aaKnown RBP21.53■■□□□ 1.04
VARS-217ENST00000440048 SPDYE7PQ495Y7 208 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 RTL6Q6ICC9 239 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 OR4F3Q6IEY1 312 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 OR56A1Q8NGH5 318 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 NEUROD4Q9HD90 331 aa21.53■■□□□ 1.04
VARS-217ENST00000440048 FAM120CQ9NX05 1096 aaKnown RBP21.53■■□□□ 1.04
VARS-217ENST00000440048 ALKBH4Q9NXW9 302 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms