RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 LRIT1Q9P2V4 623 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 ENPP5Q9UJA9 477 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 CLDN16Q9Y5I7 305 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 UNC80Q8N2C7 3258 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 XIRP2A4UGR9 3374 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 PCDH15Q96QU1 1955 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 A0A087WUU8 490 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 IGHV1OR21-1A0A087WYE8 117 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 A0A1B0GVT2 93 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 TGFBR3LH3BV60 316 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 CLDN4O14493 209 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF749O43361 778 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 FRS3O43559 492 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 BRINP1O60477 761 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 OR5F1O95221 314 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 FADS2O95864 444 aaKnown RBP10.96□□□□□ -0.65
SMAD3-202ENST00000439724 CDK1P06493 297 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 CCNA2P20248 432 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 S1PR1P21453 382 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 ALDH4A1P30038 563 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 IFNGR2P38484 337 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 MAP2K4P45985 399 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 PPM1FP49593 454 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-202ENST00000439724 SNRPGP62308 76 aaKnown RBP10.96□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF155Q12901 538 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-202ENST00000439724 SLC13A2Q13183 592 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 GRM7Q14831 915 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 TBCEQ15813 527 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-202ENST00000439724 TMEM201Q5SNT2 666 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 CCNJQ5T5M9 372 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 UBE2UQ5VVX9 321 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 PLEKHM3Q6ZWE6 761 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 ANKRD13BQ86YJ7 626 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 OR52R1Q8NGF1 315 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 GPR151Q8TDV0 419 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 DOK4Q8TEW6 326 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 PIK3R3Q92569 461 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 GGHQ92820 318 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 MCHR1Q99705 422 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 FUNDC2Q9BWH2 189 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 RBCK1Q9BYM8 510 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 EVA1AQ9H8M9 152 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 TIMMDC1Q9NPL8 285 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 SEMA4GQ9NTN9 838 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 CLN6Q9NWW5 311 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 SEMA5BQ9P283 1151 aa10.96□□□□□ -0.65
SMAD3-202ENST00000439724 WARS2Q9UGM6 360 aaKnown RBP10.96□□□□□ -0.65
SMAD3-202ENST00000439724 MN1Q10571 1320 aaPredicted RBP10.96□□□□□ -0.66
SMAD3-202ENST00000439724 CENPVL1A0A0U1RR11 272 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 CPSF4LA6NMK7 179 aaKnown RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 DUX1O43812 170 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 SOX14O95416 240 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 GIMD1P0DJR0 217 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 NID1P14543 1247 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 GLB1P16278 677 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 POU1F1P28069 291 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 TRHRP34981 398 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 GPR3P46089 330 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 ZNF136P52737 540 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 HSD17B7P56937 341 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 MAT1AQ00266 395 aaKnown RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 STX4Q12846 297 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 GPR68Q15743 365 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 DECR1Q16698 335 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 NKAIN2Q5VXU1 208 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 CCDC81Q6ZN84 652 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 SLC16A12Q6ZSM3 486 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 PTCHD4Q6ZW05 846 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 MED25Q71SY5 747 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 SLC35F3Q8IY50 421 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 SLC25A45Q8N413 288 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 GNPDA2Q8TDQ7 276 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 TRUB1Q8WWH5 349 aaKnown RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 ACOT11Q8WXI4 607 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 RIT1Q92963 219 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 YIPF6Q96EC8 236 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 RBM18Q96H35 190 aaKnown RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 AHCYL2Q96HN2 611 aaKnown RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 ZNF578Q96N58 590 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 PELOQ9BRX2 385 aaKnown RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 ALOXE3Q9BYJ1 711 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 SPRTNQ9H040 489 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 FOLH1BQ9HBA9 442 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 SLC25A19Q9HC21 320 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 C11orf16Q9NQ32 467 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 PRDM6Q9NQX0 595 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 CTPS2Q9NRF8 586 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 IRAK4Q9NWZ3 460 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 CNOT2Q9NZN8 540 aaKnown RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 SLC6A14Q9UN76 642 aa10.95□□□□□ -0.66
SMAD3-202ENST00000439724 TNRC6BQ9UPQ9 1833 aaKnown RBP10.95□□□□□ -0.66
SMAD3-202ENST00000439724 A0A1W2PPW3 197 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GXYLT2A0PJZ3 443 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 EFCAB10A6NFE3 127 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 TTC36A6NLP5 189 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 H3BMH7 237 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 H3BN98 237 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 M0R129 80 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 FMO6PO60774 539 aa10.94□□□□□ -0.66
SMAD3-202ENST00000439724 GABARAPO95166 117 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms