RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CBFBQ13951 182 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 DHCR24Q15392 516 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CCL14Q16627 93 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 UGT3A2Q3SY77 523 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 MANEALQ5VSG8 457 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 LRRC66Q68CR7 880 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 GDF6Q6KF10 455 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 PRSS55Q6UWB4 352 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 ALKAL1Q6UXT8 129 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 LRRC69Q6ZNQ3 347 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 NRSN1Q8IZ57 195 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 YIPF7Q8N8F6 280 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SH3RF2Q8TEC5 729 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 AMBRA1Q9C0C7 1298 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CSNK1G1Q9HCP0 422 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SLC2A4RGQ9NR83 387 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 PTTG3PQ9NZH4 202 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 GPR34Q9UPC5 381 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 WASF3Q9UPY6 502 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 LTBP3Q9NS15 1303 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ATAD5Q96QE3 1844 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CDK5RAP2Q96SN8 1893 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 A0A0U1RQS6 177 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 A0A1B0GVI7 797 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 NPC1O15118 1278 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 HSPA12AO43301 675 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CA12O43570 354 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 OR2B3O76000 313 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ADH1BP00325 375 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CSTBP04080 98 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 C1GALT1C1LP0DN25 315 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 COX5BP10606 129 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 GP1BBP13224 206 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 CASP3P42574 277 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CRISP1P54107 249 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 OR12D2P58182 307 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 PSMA6P60900 246 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 ISL1P61371 349 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 OCLNQ16625 522 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ZNF648Q5T619 568 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 HSDL2Q6YN16 418 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 LINC00299Q6ZSB3 139 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 RNF130Q86XS8 419 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 NRROSQ86YC3 692 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ATP6V1C2Q8NEY4 427 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 PIGKQ92643 395 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 FOXJ1Q92949 421 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 MAL2Q969L2 176 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 TCEAL4Q96EI5 215 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 C7orf50Q9BRJ6 194 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 BOCQ9BWV1 1114 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 KATNBL1Q9H079 304 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 OPN3Q9H1Y3 402 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 R3HDMLQ9H3Y0 253 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 LTB4R2Q9NPC1 389 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 MEPEQ9NQ76 525 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 ACTR10Q9NZ32 417 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 GRHPRQ9UBQ7 328 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 KCNIP3Q9Y2W7 256 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 LOC390937A0A1W2PQ73 354 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 MTMR11A4FU01 709 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CTDSP2O14595 271 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SLC16A6O15403 523 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CCL16O15467 120 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CIDEAO60543 219 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 GJB3O75712 270 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 RBBP9O75884 186 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 TNFP01375 233 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 FHP07954 510 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 TNFRSF1BP20333 461 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 RPS3P23396 243 aaKnown RBP eCLIP6.04□□□□□ -1.44
BDNF-211ENST00000439476 HSD11B1P28845 292 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 GRK5P34947 590 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 HMGCLP35914 325 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ACTR1BP42025 376 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 FLI1Q01543 452 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 GLO1Q04760 184 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 VEZF1Q14119 521 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 KRBOX4Q5JUW0 171 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 GPRC6AQ5T6X5 926 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CNKSR3Q6P9H4 555 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SLC16A13Q7RTY0 426 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 PRSS42Q7Z5A4 293 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 IQCHQ86VS3 1027 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 FAM217AQ8IXS0 508 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SLC22A15Q8IZD6 547 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 MDGA1Q8NFP4 955 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ZNF461Q8TAF7 563 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SGTBQ96EQ0 304 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 APIPQ96GX9 242 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SMIM14Q96QK8 99 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 PAPOLGQ9BWT3 736 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 ACPTQ9BZG2 426 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CCDC86Q9H6F5 360 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 FBRSQ9HAH7 460 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ZNF69Q9UC07 566 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 MEGF11A6BM72 1044 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 C9J4A7 227 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms