RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SORT1Q99523 831 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 C20orf27Q9GZN8 174 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 SLC6A15Q9H2J7 730 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 UBQLN3Q9H347 655 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 PTGES2Q9H7Z7 377 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 NEUROD4Q9HD90 331 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 EQTNQ9NQ60 294 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 PNPOQ9NVS9 261 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 NTMQ9P121 344 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 PPP4R1LQ9P1A2 415 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 FAF1Q9UNN5 650 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-216ENST00000439475 ABCG2Q9UNQ0 655 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 MRPS18CQ9Y3D5 142 aaKnown RBP9.56□□□□□ -0.88
MCF2L-216ENST00000439475 WIF1Q9Y5W5 379 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 SNX8Q9Y5X2 465 aa9.56□□□□□ -0.88
MCF2L-216ENST00000439475 C2orf72A6NCS6 295 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 ADAM10O14672 748 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 HDAC3O15379 428 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 HNRNPRO43390 633 aaKnown RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 HPGDP15428 266 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 COL8A1P27658 744 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 HTR1EP28566 365 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 CHRNB4P30926 498 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 LCN1P31025 176 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 SRD5A2P31213 254 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 EVI2BP34910 448 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 CLNS1AP54105 237 aaKnown RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 DIO3P55073 304 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 C21orf58P58505 322 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 C17orf67Q0P5P2 114 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 PMPCAQ10713 525 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 ZNF630Q2M218 657 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 DPY19L1Q2PZI1 675 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 PGS1Q32NB8 556 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 EIPR1Q53HC9 387 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 EMC4Q5J8M3 183 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 WIPI1Q5MNZ9 446 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 C1orf185Q5T7R7 199 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 FNDC7Q5VTL7 733 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 CES4AQ5XG92 561 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 AAGABQ6PD74 315 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 SPATA19Q7Z5L4 167 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 YRDCQ86U90 279 aaKnown RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 JADE3Q92613 823 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 ABTB1Q969K4 478 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 NTNG2Q96CW9 530 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 FAM120BQ96EK7 910 aaKnown RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 STACQ99469 402 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 G6PC3Q9BUM1 346 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 TBL1XR1Q9BZK7 514 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 PIGUQ9H490 435 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 MEAF6Q9HAF1 191 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 GALNT9Q9HCQ5 603 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 FAM120CQ9NX05 1096 aaKnown RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 GIN1Q9NXP7 522 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 HRH3Q9Y5N1 445 aa9.55□□□□□ -0.88
MCF2L-216ENST00000439475 NUP214P35658 2090 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 PHF3Q92576 2039 aaKnown RBP9.55□□□□□ -0.88
MCF2L-216ENST00000439475 DUXAA6NLW8 204 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 KLF11O14901 512 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 SCO2O43819 266 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 SNNO75324 88 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 C6orf47O95873 294 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 HMGN2P05204 90 aaKnown RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 KITP10721 976 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 BMP7P18075 431 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 ATP6V1C1P21283 382 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 KIR3DL1P43629 444 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 ZFP36L2P47974 494 aaKnown RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 DSCR4P56555 118 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 NUP107P57740 925 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 POU6F2P78424 691 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 CRYZQ08257 329 aaKnown RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 RCAN2Q14206 197 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 LASP1Q14847 261 aaKnown RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 NHSL2Q5HYW2 709 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 VASNQ6EMK4 673 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 OGFOD2Q6N063 350 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 MFSD12Q6NUT3 480 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 CDC73Q6P1J9 531 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 WDR53Q7Z5U6 358 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 CAMKMTQ7Z624 323 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 IFNEQ86WN2 208 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 WDR75Q8IWA0 830 aaKnown RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 RIMKLAQ8IXN7 391 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 KRTCAP2Q8N6L1 136 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 COX18Q8N8Q8 333 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 WDSUB1Q8N9V3 476 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 FAM83FQ8NEG4 500 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 OR8J2Q8NGG1 315 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 PSMA8Q8TAA3 256 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 PIWIL2Q8TC59 973 aaKnown RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 SFXN5Q8TD22 340 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 DYDC1Q8WWB3 177 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 PIK3R3Q92569 461 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 HOXB13Q92826 284 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 RMND5BQ96G75 393 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 ATP6V1G3Q96LB4 118 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 ZBTB18Q99592 522 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 TIMP4Q99727 224 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms