RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TMED9Q9BVK6 235 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 MBD1Q9UIS9 605 aaPredicted RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 KPNA5O15131 536 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SLC16A5O15375 505 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 MTRF1O75570 445 aaKnown RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 ACP2P11117 423 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 AP1S1P61966 158 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 CTAG1AP78358 180 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SEMG2Q02383 582 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 DBPQ10586 325 aaPredicted RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 RAB40BQ12829 278 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 MPEG1Q2M385 716 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 REEP3Q6NUK4 255 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 TMEM81Q6P7N7 255 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 DEF8Q6ZN54 512 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 RTL4Q6ZR62 310 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 TPGS1Q6ZTW0 290 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 TSPAN33Q86UF1 283 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 SLC30A8Q8IWU4 369 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 YAF2Q8IY57 180 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 CBARPQ8N350 705 aaPredicted RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 ZBTB44Q8NCP5 570 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 GPR32P1Q8NGA4 272 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 WFDC5Q8TCV5 224 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 OTUB2Q96DC9 234 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 THAP7Q9BT49 309 aaPredicted RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 C8orf33Q9H7E9 229 aaPredicted RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 ERVMER34-1Q9H9K5 563 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 NUDT15Q9NV35 164 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 CLCA2Q9UQC9 943 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 EXOSC1Q9Y3B2 195 aaKnown RBP8.05□□□□□ -1.12
HPS4-206ENST00000439453 STON1Q9Y6Q2 735 aa8.05□□□□□ -1.12
HPS4-206ENST00000439453 IRGMA1A4Y4 181 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 AGAP14A8MT82 685 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 K7ERQ8 282 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 GABRPO00591 440 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 EGFP01133 1207 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 GBAP04062 536 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 DCNP07585 359 aaKnown RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 CFL1P23528 166 aaKnown RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 GKP32189 559 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 BTCP35070 178 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 RPS13P62277 151 aaKnown RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 NTRK2Q16620 822 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 RAET1GQ6H3X3 334 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 Q6ZS52 159 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 RBM45Q8IUH3 476 aaKnown RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 ARIH2OSQ8N7S6 290 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 PRSS33Q8NF86 280 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 FAM3CQ92520 227 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 FGF11Q92914 225 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 HGDQ93099 445 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 PPCDCQ96CD2 204 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 OTUB1Q96FW1 271 aaPredicted RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 C19orf43Q9BQ61 176 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 MRPS18AQ9NVS2 196 aaKnown RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 FBXL21Q9UKT6 434 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 CACNG2Q9Y698 323 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 RNF215Q9Y6U7 377 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 PLXNB3Q9ULL4 1909 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 LATS1O95835 1130 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 LALBAP00709 142 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 CFDP00746 253 aaPredicted RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 FURINP09958 794 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 LIMS3P0CW19 117 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 LIMS4P0CW20 117 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 OR12D1P0DN82 309 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 TFPIP10646 304 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 GIPRP48546 466 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 MAP2K6P52564 334 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 GBX2P52951 348 aaPredicted RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 DCDC1P59894 354 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 BCL2L1Q07817 233 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 ZNF763Q0D2J5 394 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 INSL4Q14641 139 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 SHFQ7M4L6 423 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 OR7G3Q8NG95 312 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 OR8K5Q8NH50 307 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 NXPE2Q96DL1 559 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 OR2M2Q96R28 347 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 ENAMQ9NRM1 1142 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 RDH8Q9NYR8 311 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 TNFRSF10DQ9UBN6 386 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 C2orf92A0A1B0GVN3 265 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 C5orf58C9J3I9 102 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 TOR1AO14656 332 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 NME6O75414 186 aaPredicted RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 PPM1BO75688 479 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 NFATC1O95644 943 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 HLA-DPB1P04440 258 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 SRPRAP08240 638 aaKnown RBP8.04□□□□□ -1.12
HPS4-206ENST00000439453 SYPP08247 313 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 GAAP10253 952 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 ADH5P11766 374 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 AVPR2P30518 371 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 PUDPQ08623 228 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 C2orf80Q0P641 193 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 BTN1A1Q13410 526 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 CAMK2DQ13557 499 aa8.04□□□□□ -1.12
HPS4-206ENST00000439453 ATP13A5Q4VNC0 1218 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms