RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ZNF670-ZNF695F2Z2N8 137 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC9A3R1O14745 358 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SCN2BO60939 215 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC22A5O76082 557 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 MSL3P1P0C860 447 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 ELK1P19419 428 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SHC1P29353 583 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 GRPRP30550 384 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 MMP12P39900 470 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 EXOSC2Q13868 293 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 LRRC37A5PQ49AS3 106 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 C11orf88Q6PI97 169 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF527Q8NB42 609 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 DENND6BQ8NEG7 585 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR4K5Q8NGD3 323 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC7A13Q8TCU3 470 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 GEMIN6Q8WXD5 167 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 FBXW5Q969U6 566 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 DTD2Q96FN9 168 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 LYSMD1Q96S90 227 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 KXD1Q9BQD3 176 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC35C2Q9NQQ7 365 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 RPL36Q9Y3U8 105 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 HSPE1-MOB4S4R3N1 261 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 FXYD6-FXYD2A0A087WZ82 144 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 QSOX1O00391 747 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 NDUFS4O43181 175 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 NARSO43776 548 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 SCG5P05408 212 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 POU3F2P20265 443 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 AHRP35869 848 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 MAGEB1P43366 347 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 PRLHRP49683 370 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 MAP2K6P52564 334 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 AGFG1P52594 562 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 GPR176Q14439 515 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 MELKQ14680 651 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 NDUFAF5Q5TEU4 345 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLX4IPQ5VYV7 408 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 XKRXQ6PP77 449 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 C7orf61Q8IZ16 206 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 CRIPAKQ8N1N5 446 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 FBXL6Q8N531 539 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 LSMEM1Q8N8F7 131 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR8J2Q8NGG1 315 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 DDOQ99489 341 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 GINS4Q9BRT9 223 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 GSDMCQ9BYG8 508 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 FXYD6Q9H0Q3 95 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 GPATCH2Q9NW75 528 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 PLEKHB1Q9UF11 243 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 LOC100509620A0A075B734 347 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC5A10A0PJK1 596 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR6C74A6NCV1 312 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 ARHGEF15O94989 841 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 DHFRP00374 187 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 RLN1P04808 185 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 PPIBP23284 216 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 CDH11P55287 796 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 DSG2Q14126 1118 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 PRSS53Q2L4Q9 553 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 KLHL22Q53GT1 634 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF542PQ5EBM4 170 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 LAMTOR1Q6IAA8 161 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 PLBD1Q6P4A8 553 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 ARSKQ6UWY0 536 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF730Q6ZMV8 503 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR52I1Q8NGK6 324 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR8K3Q8NH51 312 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF689Q96CS4 500 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 RADILQ96JH8 1075 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 EPYCQ99645 322 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 TRAF4Q9BUZ4 470 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 GON7Q9BXV9 100 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 CCDC86Q9H6F5 360 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 C11orf49Q9H6J7 331 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 RC3H2Q9HBD1 1191 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 RBFOX1Q9NWB1 397 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 RASD1Q9Y272 281 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 KLK4Q9Y5K2 254 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 RP1P56715 2156 aa9.34□□□□□ -0.91
CDC42SE1-202ENST00000439374 A0A1W2PS29 197 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 SHISA3A0PJX4 238 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 PRICKLE3O43900 615 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 GMFGO60234 142 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 TIMP1P01033 207 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 FURINP09958 794 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 PTX3P26022 381 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 PPP2R1BP30154 601 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 MVDP53602 400 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 HCCSP53701 268 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 TAS2R41P59536 307 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 TDGQ13569 410 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 BEX5Q5H9J7 111 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 LYPD4Q6UWN0 246 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF761Q86XN6 746 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 SLC38A5Q8WUX1 472 aa9.33□□□□□ -0.92
CDC42SE1-202ENST00000439374 CHTF18Q8WVB6 975 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms