RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ALOX12BO75342 701 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 IFNA21P01568 189 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 ZNF806P0C7X5 589 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 FECHP22830 423 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 PEX2P28328 305 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 UQCRC1P31930 480 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 GMPRP36959 345 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 TAS2R43P59537 309 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 MZT1Q08AG7 82 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 RSU1Q15404 277 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 AGAP7PQ5VUJ5 663 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 SLC18B1Q6NT16 456 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 YTHDF3Q7Z739 585 aaKnown RBP11.41□□□□□ -0.58
NEK1-201ENST00000439128 AGAP4Q96P64 663 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 ZNF160Q9HCG1 818 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 ICKQ9UPZ9 632 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 POLHQ9Y253 713 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 C17orf113A0A1B0GUU1 675 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 ENTPD6O75354 484 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 RFPL1O75677 317 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 LPLP06858 475 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 HEXAP06865 529 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 MMP2P08253 660 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 CD3GP09693 182 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 GKN3PP0CG01 181 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 CPMP14384 443 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 MOGSQ13724 837 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 CDK10Q15131 360 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 SEC23BQ15437 767 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 ZNF829Q3KNS6 432 aaPredicted RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 UBE2Q1Q7Z7E8 422 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 FAM46AQ96IP4 442 aaKnown RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 LIN28AQ9H9Z2 209 aaKnown RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 TRAPPC13A5PLN9 417 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 GPR75O95800 540 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 MSL3P1P0C860 447 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 HIST1H1TP22492 207 aaPredicted RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 AOAHP28039 575 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 RORCP51449 518 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 EXT1Q16394 746 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 TMEM176BQ3YBM2 270 aaPredicted RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 SLC22A10Q63ZE4 541 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 DHRS13Q6UX07 377 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 CADM1Q9BY67 442 aaKnown RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 SLC35A3Q9Y2D2 325 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 NOSIPQ9Y314 301 aaKnown RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 GOLGA4Q13439 2230 aaKnown RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 HTRA2O43464 458 aaPredicted RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 HTR6P50406 440 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 RGS21Q2M5E4 152 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 KANK2Q63ZY3 851 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 FAM109BQ6ICB4 259 aaPredicted RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 SYT13Q7L8C5 426 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 FOXRED2Q8IWF2 684 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 OR2T4Q8NH00 348 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 LINC01599Q8WXQ3 324 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 TMEM80Q96HE8 168 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 WDR83Q9BRX9 315 aaKnown RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 PLEK2Q9NYT0 353 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 TAS2R10Q9NYW0 307 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 A0A1W2PPC4 97 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 ZBTB22O15209 634 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 FGF3P11487 239 aaPredicted RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 GNRHRP30968 328 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 EIF2B2P49770 351 aaKnown RBP11.4□□□□□ -0.58
NEK1-201ENST00000439128 SLC18A1P54219 525 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 C4orf46Q504U0 113 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 PLET1Q6UQ28 207 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 ISCA2Q86U28 154 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 DEFB127Q9H1M4 99 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 SNX11Q9Y5W9 270 aa11.4□□□□□ -0.58
NEK1-201ENST00000439128 PTHP01270 115 aa11.4□□□□□ -0.59
NEK1-201ENST00000439128 ZNF610Q8N9Z0 462 aa11.4□□□□□ -0.59
NEK1-201ENST00000439128 OR8J3Q8NGG0 315 aa11.4□□□□□ -0.59
NEK1-201ENST00000439128 OR5D16Q8NGK9 328 aa11.4□□□□□ -0.59
NEK1-201ENST00000439128 FCGR1BQ92637 280 aa11.4□□□□□ -0.59
NEK1-201ENST00000439128 DECR2Q9NUI1 292 aa11.4□□□□□ -0.59
NEK1-201ENST00000439128 SLC7A7Q9UM01 511 aa11.4□□□□□ -0.59
NEK1-201ENST00000439128 GALR3O60755 368 aaPredicted RBP11.39□□□□□ -0.59
NEK1-201ENST00000439128 PRH1P02810 166 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 MYF5P13349 255 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 AHRP35869 848 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 CHRFAM7AQ494W8 412 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 GOT1L1Q8NHS2 421 aaPredicted RBP11.39□□□□□ -0.59
NEK1-201ENST00000439128 THRSPQ92748 146 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 CHRDQ9H2X0 955 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 FGF22Q9HCT0 170 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 TEX10Q9NXF1 929 aaPredicted RBP11.39□□□□□ -0.59
NEK1-201ENST00000439128 ACTR3BQ9P1U1 418 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 IGHV3-20A0A0C4DH32 117 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 LOC285095A0A1B0GVY8 99 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 FABP12A6NFH5 140 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 ZNF99A8MXY4 864 aaPredicted RBP11.39□□□□□ -0.59
NEK1-201ENST00000439128 SLC14A2Q15849 920 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 ARRDC2Q8TBH0 407 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 PTERQ96BW5 349 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 CCDC74BQ96LY2 380 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 AMDHD1Q96NU7 426 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 NUDT22Q9BRQ3 303 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 SMOC1Q9H4F8 434 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms