RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 OR52I2Q8NH67 350 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ASB5Q8WWX0 329 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ESR2Q92731 530 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ECHDC3Q96DC8 303 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PELI1Q96FA3 418 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 KAZALD1Q96I82 304 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 C3orf30Q96M34 536 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF582Q96NG8 517 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYP2S1Q96SQ9 504 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 HSD17B14Q9BPX1 270 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 FUCA2Q9BTY2 467 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 MCRIP2Q9BUT9 160 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TSSK1BQ9BXA7 367 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 QTRT1Q9BXR0 403 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 DGCR6LQ9BY27 220 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PARD6BQ9BYG5 372 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TPSD1Q9BZJ3 242 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SPRTNQ9H040 489 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SEBOXQ9HB31 216 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC38A10Q9HBR0 1119 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACSS1Q9NUB1 689 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF701Q9NV72 531 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 C1RLQ9NZP8 487 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 LHX3Q9UBR4 397 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 NDRG3Q9UGV2 375 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF490Q9ULM2 529 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ADAMTS5Q9UNA0 930 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SH2B3Q9UQQ2 575 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 GSTK1Q9Y2Q3 226 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PTGDR2Q9Y5Y4 395 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRAMEF33A0A0G2JMD5 474 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRSS37A4D1T9 235 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 DDTLA6NHG4 134 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CASTOR2A6NHX0 329 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 ERI2A8K979 691 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 KCNU1A8MYU2 1149 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM150CB9EJG8 249 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 M0R296 226 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 FBP2O00757 339 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CHEK1O14757 476 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 RAB29O14966 203 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CHUKO15111 745 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC16A5O15375 505 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 INSIG1O15503 277 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 HSPA12AO43301 675 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 B4GAT1O43505 415 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 LDB2O43679 373 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SCO2O43819 266 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 GMDSO60547 372 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRAMEF10O60809 474 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SH3BGRLO75368 114 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 RPS6KA5O75582 802 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 VAMP5O95183 116 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 RAB3DO95716 219 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 BAG3O95817 575 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CST4P01036 141 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 GAPDHP04406 335 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 RPN2P04844 631 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 MMP3P08254 477 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 UBCP0CG48 685 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 ENO3P13929 434 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 GP9P14770 177 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRPS1L1P21108 318 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 EPHX2P34913 555 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 AHRP35869 848 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 UQCRFS1P47985 274 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 NPBWR2P48146 333 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 TGM4P49221 684 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 MRPL19P49406 292 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 MMP15P51511 669 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYP2J2P51589 502 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 GEMP55040 296 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 FOXG1P55316 489 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLDN18P56856 261 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 KCNK10P57789 538 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 WDR5P61964 334 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 RPS7P62081 194 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 RPL10AP62906 217 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 MAT1AQ00266 395 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 PSG6Q00889 435 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 E2F1Q01094 437 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 ILF2Q12905 390 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 NME3Q13232 169 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CDH18Q13634 790 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CAPRIN1Q14444 709 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 GANABQ14697 944 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 UAP1Q16222 522 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 EXOC3L4Q17RC7 722 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 C2CD6Q53TS8 623 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 C5orf47Q569G3 176 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAM69BQ5VUD6 431 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 GPR107Q5VW38 600 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 LIPJQ5W064 366 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SIGIRRQ6IA17 410 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 LCN10Q6JVE6 187 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC18B1Q6NT16 456 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 ANKRD54Q6NXT1 300 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 RHBDF2Q6PJF5 856 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF534Q76KX8 674 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 H2BFWTQ7Z2G1 175 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms