RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 SERHL2Q9H4I8 314 aa12.43□□□□□ -0.42
EXT1-203ENST00000437196 TMEM38AQ9H6F2 299 aa12.43□□□□□ -0.42
EXT1-203ENST00000437196 TRIM45Q9H8W5 580 aaPredicted RBP12.43□□□□□ -0.42
EXT1-203ENST00000437196 CACYBPQ9HB71 228 aaKnown RBP12.43□□□□□ -0.42
EXT1-203ENST00000437196 A4GALTQ9NPC4 353 aa12.43□□□□□ -0.42
EXT1-203ENST00000437196 LRFN1Q9P244 771 aa12.43□□□□□ -0.42
EXT1-203ENST00000437196 USP24Q9UPU5 2620 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 C5orf58C9J3I9 102 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 ERVH48-1M5A8F1 160 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 NME6O75414 186 aaPredicted RBP12.42□□□□□ -0.42
EXT1-203ENST00000437196 TNFRSF21O75509 655 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 WDPCPO95876 746 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 T-ENOLP0DO92 83 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 HPGDP15428 266 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 SOX3P41225 446 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 CLK3P49761 638 aaKnown RBP12.42□□□□□ -0.42
EXT1-203ENST00000437196 BNIP1Q12981 228 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 COL28A1Q2UY09 1125 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 ZNF791Q3KP31 576 aaPredicted RBP12.42□□□□□ -0.42
EXT1-203ENST00000437196 DNAL1Q4LDG9 190 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 GPAT3Q53EU6 434 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 TBCELQ5QJ74 424 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 PRAMEF8Q5VWM4 474 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 PRAMEF7Q5VXH5 474 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 IL20RBQ6UXL0 311 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 C16orf47Q6ZP98 133 aaPredicted RBP12.42□□□□□ -0.42
EXT1-203ENST00000437196 RTL4Q6ZR62 310 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 AMER2Q8N7J2 671 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 ZNF527Q8NB42 609 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 C11orf65Q8NCR3 313 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 OR10A6Q8NH74 314 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 FAM110BQ8TC76 370 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 RAB8BQ92930 207 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 OTUB1Q96FW1 271 aaPredicted RBP12.42□□□□□ -0.42
EXT1-203ENST00000437196 ABHD17AQ96GS6 310 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 SDF2Q99470 211 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 ZBTB20Q9HC78 741 aaPredicted RBP12.42□□□□□ -0.42
EXT1-203ENST00000437196 TIMMDC1Q9NPL8 285 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 ADA2Q9NZK5 511 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 CNIH4Q9P003 139 aa12.42□□□□□ -0.42
EXT1-203ENST00000437196 GXYLT2A0PJZ3 443 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 GYG2O15488 501 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 SLC28A2O43868 658 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 MAN1A2O60476 641 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 TSPAN2O60636 221 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 DPM1O60762 260 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 OR6B1O95007 311 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 CD46P15529 392 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 CD96P40200 585 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 RFX3P48380 749 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 SLC7A2P52569 658 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 EEFSECP57772 596 aaKnown RBP12.41□□□□□ -0.42
EXT1-203ENST00000437196 SLC25A3Q00325 362 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 TUBA3CQ13748 450 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 RABL3Q5HYI8 236 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
EXT1-203ENST00000437196 INTS11Q5TA45 600 aaKnown RBP12.41□□□□□ -0.42
EXT1-203ENST00000437196 TUBA3EQ6PEY2 450 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 FIGNL1Q6PIW4 674 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 C19orf48Q6RUI8 117 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 LRRC74BQ6ZQY2 392 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 NET1Q7Z628 596 aaPredicted RBP12.41□□□□□ -0.42
EXT1-203ENST00000437196 SLC15A3Q8IY34 581 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 PRR22Q8IZ63 422 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 DEFB107AQ8IZN7 70 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 RBM15BQ8NDT2 890 aaKnown RBP12.41□□□□□ -0.42
EXT1-203ENST00000437196 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 OR4N2Q8NGD1 307 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 C9orf43Q8TAL5 461 aaPredicted RBP12.41□□□□□ -0.42
EXT1-203ENST00000437196 WBP1Q96G27 269 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 REXO5Q96IC2 774 aaKnown RBP12.41□□□□□ -0.42
EXT1-203ENST00000437196 ADOQ96SZ5 270 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.41□□□□□ -0.42
EXT1-203ENST00000437196 IKZF5Q9H5V7 419 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 ABCD2Q9UBJ2 740 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 PRPF19Q9UMS4 504 aaKnown RBP12.41□□□□□ -0.42
EXT1-203ENST00000437196 ANGPT4Q9Y264 503 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 WDR45Q9Y484 360 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 EPG5Q9HCE0 2579 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 EXPH5Q8NEV8 1989 aa12.41□□□□□ -0.42
EXT1-203ENST00000437196 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 TRAV17A0A0B4J275 112 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 A0A0G2JPF8 293 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 HNRNPCL2B2RXH8 293 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 HNRNPCL3B7ZW38 293 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 PDE9AO76083 593 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 P04436 131 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 BCHEP06276 602 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 NGFRP08138 427 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 TFPTP0C1Z6 253 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 HNRNPCL4P0DMR1 293 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 ARAFP10398 606 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 ENDOUP21128 410 aaKnown RBP12.4□□□□□ -0.42
EXT1-203ENST00000437196 CDK6Q00534 326 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 SNTA1Q13424 505 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 OR1C1Q15619 314 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 LINC00303Q3SY05 128 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 FLYWCH1Q4VC44 716 aa12.4□□□□□ -0.42
EXT1-203ENST00000437196 LACTB2Q53H82 288 aaPredicted RBP12.4□□□□□ -0.42
EXT1-203ENST00000437196 AP1ARQ63HQ0 302 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms