RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 MRPL11Q9Y3B7 192 aaKnown RBP3.02□□□□□ -1.93
LINC00353-201ENST00000435401 RGPD8O14715 1765 aaPredicted RBP3.02□□□□□ -1.93
LINC00353-201ENST00000435401 XRN1Q8IZH2 1706 aaKnown RBP3.02□□□□□ -1.93
LINC00353-201ENST00000435401 NOS1P29475 1434 aa3.02□□□□□ -1.93
LINC00353-201ENST00000435401 ARHGAP31Q2M1Z3 1444 aa3.02□□□□□ -1.93
LINC00353-201ENST00000435401 NUP155O75694 1391 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 TMEM94Q12767 1356 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 COL16A1Q07092 1604 aaPredicted RBP3.01□□□□□ -1.93
LINC00353-201ENST00000435401 CCT8L1PA6NM43 557 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 H0YL77 283 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.01□□□□□ -1.93
LINC00353-201ENST00000435401 SAP18O00422 153 aaKnown RBP3.01□□□□□ -1.93
LINC00353-201ENST00000435401 MCF2LO15068 1137 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 CFLARO15519 480 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 TOM1O60784 492 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 PDE5AO76074 875 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 GOT2P00505 430 aaKnown RBP3.01□□□□□ -1.93
LINC00353-201ENST00000435401 WNT2P09544 360 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 HSD17B1P14061 328 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 TSPAN8P19075 237 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 IL10P22301 178 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 PPP2R1BP30154 601 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 MAGEA4P43358 317 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 SLC7A2P52569 658 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 MFAP2P55001 183 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ZNF85Q03923 595 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ZNF33BQ06732 778 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 SNX1Q13596 522 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 C14orf28Q4W4Y0 310 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 FAM182AQ5T1J6 154 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 LINC00242Q5T6M2 205 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 TAF3Q5VWG9 929 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 REP15Q6BDI9 236 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 RAET1GQ6H3X3 334 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ATRAIDQ6UW56 229 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ABRAXAS1Q6UWZ7 409 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 Q6ZR54 194 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 RBM43Q6ZSC3 357 aaKnown RBP3.01□□□□□ -1.93
LINC00353-201ENST00000435401 HIPK1Q86Z02 1210 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 LRRC49Q8IUZ0 686 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 OR52J3Q8NH60 311 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 FLVCR1-AS1Q8TAF5 88 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 DLX4Q92988 240 aaPredicted RBP3.01□□□□□ -1.93
LINC00353-201ENST00000435401 TSPY26PQ9H489 355 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ACTR8Q9H981 624 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ROPN1Q9HAT0 212 aaPredicted RBP3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ESM1Q9NQ30 184 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 FAM114A2Q9NRY5 505 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 GDAP2Q9NXN4 497 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 GPR83Q9NYM4 423 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 P2RX2Q9UBL9 471 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 FZR1Q9UM11 496 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 RNF24Q9Y225 148 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 RNF115Q9Y4L5 304 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 FKBP7Q9Y680 259 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 TRPM2O94759 1503 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 NEXMIFQ5QGS0 1516 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 IFT172Q9UG01 1749 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 ZFYVE9O95405 1425 aa3.01□□□□□ -1.93
LINC00353-201ENST00000435401 NOTCH2Q04721 2471 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 BICDL2A1A5D9 508 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 E2F3O00716 465 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 LANCL1O43813 399 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 SSX5O60225 188 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 ZNF253O75346 499 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 B3GALNT1O75752 331 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 AKR7A3O95154 331 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 IGHV3-9P01782 118 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 GSTA1P08263 222 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 KRTAP1-4P0C5Y4 121 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 RALAP11233 206 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 GP9P14770 177 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 DNAJB1P25685 340 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 NOP14P78316 857 aaKnown RBP3□□□□□ -1.93
LINC00353-201ENST00000435401 CRMP1Q14194 572 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 ACSF3Q4G176 576 aaPredicted RBP3□□□□□ -1.93
LINC00353-201ENST00000435401 UNC5DQ6UXZ4 953 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 TMUB2Q71RG4 321 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 ERASQ7Z444 233 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 GOLGA7Q7Z5G4 137 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 NAXDQ8IW45 347 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 CENPSQ8N2Z9 138 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 FAM71CQ8NEG0 241 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 OR52B4Q8NGK2 314 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 TOMM40LQ969M1 308 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 RBM24Q9BX46 236 aaKnown RBP3□□□□□ -1.93
LINC00353-201ENST00000435401 NMNAT2Q9BZQ4 307 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 CCSER1Q9C0I3 900 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 MBD2Q9UBB5 411 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 BCAP29Q9UHQ4 241 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 PURGQ9UJV8 347 aaKnown RBP3□□□□□ -1.93
LINC00353-201ENST00000435401 NKTRP30414 1462 aaKnown RBP3□□□□□ -1.93
LINC00353-201ENST00000435401 RPRD2Q5VT52 1461 aaKnown RBP3□□□□□ -1.93
LINC00353-201ENST00000435401 ADAMTS13Q76LX8 1427 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 LRP6O75581 1613 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 NHSL1Q5SYE7 1610 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 DIP2AQ14689 1571 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 MSH6P52701 1360 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 PLEKHG1Q9ULL1 1385 aa3□□□□□ -1.93
LINC00353-201ENST00000435401 ATP8B3O60423 1300 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms