RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TRIB3Q96RU7 358 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 AUNIPQ9H7T9 357 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 FZD3Q9NPG1 666 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 TMEM248Q9NWD8 314 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ST3GAL5Q9UNP4 418 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 BTAF1O14981 1849 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ARID1BQ8NFD5 2236 aaPredicted RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 DISC1C4P0D8 188 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 SLC19A2O60779 497 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 CKMP06732 381 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 EPHX1P07099 455 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 CSNK1DP48730 415 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 DOC2AQ14183 400 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 OR5M3Q8NGP4 307 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 SLC7A13Q8TCU3 470 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ADAMTS19Q8TE59 1207 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 NXPE3Q969Y0 559 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 TSNAXQ99598 290 aaKnown RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ACTR6Q9GZN1 396 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 PLXNA1Q9UIW2 1896 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 TRDV1A0A1B0GX56 115 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 PRAMEF11O60813 436 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ETHE1O95571 254 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 FGF2P09038 288 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 KCNE1P15382 129 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 RAD52P43351 418 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 RPS24P62847 133 aaKnown RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 SLC36A2Q495M3 483 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 C9orf131Q5VYM1 1079 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 NCEH1Q6PIU2 408 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 RBMS3Q6XE24 437 aaKnown RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 HDDC3Q8N4P3 179 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 LMNTD1Q8N9Z9 388 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 C16orf70Q9BSU1 422 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 CYSLTR2Q9NS75 346 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 MCRIP1C9JLW8 97 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 FZD7O75084 574 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ADAP00813 363 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 BCHEP06276 602 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 H1F0P07305 194 aaKnown RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 SNRPBP14678 240 aaKnown RBP7.03□□□□□ -1.28
CPSF6-202ENST00000435070 RAB13P51153 203 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 HLA-DQA1Q5Y7H0 255 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ZCCHC12Q6PEW1 402 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 LIMS2Q7Z4I7 341 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 LRRTM4Q86VH4 590 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 OXR1Q8N573 874 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 GPR26Q8NDV2 337 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 ING5Q8WYH8 240 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 TTTY10Q9BZA0 68 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 TM6SF2Q9BZW4 377 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 NEUROD4Q9HD90 331 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 SLC6A20Q9NP91 592 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 SLC6A5Q9Y345 797 aa7.03□□□□□ -1.28
CPSF6-202ENST00000435070 CASC3O15234 703 aaKnown RBP7.02□□□□□ -1.28
CPSF6-202ENST00000435070 NTN1O95631 604 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 F12P00748 615 aaPredicted RBP7.02□□□□□ -1.28
CPSF6-202ENST00000435070 RHOCP08134 193 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 IRS1P35568 1242 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 ANXA11P50995 505 aaKnown RBP7.02□□□□□ -1.28
CPSF6-202ENST00000435070 SLC3A1Q07837 685 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 SLC25A35Q3KQZ1 300 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 DNAJB7Q7Z6W7 309 aaPredicted RBP7.02□□□□□ -1.28
CPSF6-202ENST00000435070 IQCHQ86VS3 1027 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 PXYLP1Q8TE99 480 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 FCRL4Q96PJ5 515 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 FNIP2Q9P278 1114 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 TRPC4Q9UBN4 977 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 PCOLCE2Q9UKZ9 415 aa7.02□□□□□ -1.28
CPSF6-202ENST00000435070 GON4LQ3T8J9 2241 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF236Q9UL36 1845 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 COL16A1Q07092 1604 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SLC9B1P1A6NJY1 282 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 WASH4PA8MWX3 477 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 CBSLP0DN79 551 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PTHLHP12272 177 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 CBSP35520 551 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 S100A12P80511 92 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 UBXN11Q5T124 520 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 C16orf59Q7L2K0 433 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 OR4D9Q8NGE8 314 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 OR52B4Q8NGK2 314 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 EID2BQ96D98 161 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SEMA4CQ9C0C4 833 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 P2RY12Q9H244 342 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 PURGQ9UJV8 347 aaKnown RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 RCE1Q9Y256 329 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 TSC2P49815 1807 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ANKDD1BA6NHY2 528 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 M0R3H8 397 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 DPM1O60762 260 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SEMA7AO75326 666 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ECDO95905 644 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ANXA7P20073 488 aaKnown RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ELAVL4P26378 380 aaKnown RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF770Q6IQ21 691 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SERPINA13PQ6UXR4 307 aa7.02□□□□□ -1.29
CPSF6-202ENST00000435070 LRRC28Q86X40 367 aaPredicted RBP7.02□□□□□ -1.29
CPSF6-202ENST00000435070 SERPINA12Q8IW75 414 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms