RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TDP1Q9NUW8 608 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 PTTG3PQ9NZH4 202 aa10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 SIRT4Q9Y6E7 314 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-202ENST00000433297 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF840PA6NDX5 716 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF593O00488 134 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SOCS6O14544 535 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 TSPAN6O43657 245 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 RGS9O75916 674 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 LPLP06858 475 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SULT1A3P0DMM9 295 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SULT1A4P0DMN0 295 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 PEPDP12955 493 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 PAICSP22234 425 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 TAS2R41P59536 307 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 OC90Q02509 493 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SP140Q13342 867 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 PLEKHS1Q5SXH7 462 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 FAM71E1Q6IPT2 247 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC25A25Q6KCM7 469 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SFXN4Q6P4A7 337 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SMARCD3Q6STE5 483 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 Q6ZTK2 550 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 UBE2Q1Q7Z7E8 422 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 OR10Z1Q8NGY1 313 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 APOBEC4Q8WW27 367 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 PCDHB16Q9NRJ7 776 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 CPNE7Q9UBL6 633 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 MGAT4CQ9UBM8 478 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 PRRC2BQ5JSZ5 2229 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 A0A0G2JN53 185 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 CPSF4LA6NMK7 179 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 PDCD5O14737 125 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 RNF13O43567 381 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 WNT1P04628 370 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ALPPL2P10696 532 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 CLLU1OSQ5K130 101 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 EOGTQ5NDL2 527 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 HIST2H2AA3Q6FI13 130 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 PYHIN1Q6K0P9 492 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 FAM198BQ6UWH4 519 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 LINC00518Q8N0U6 118 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 KRT78Q8N1N4 520 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SMAP2Q8WU79 429 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ARMC5Q96C12 935 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ECHDC3Q96DC8 303 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 CXorf40BQ96DE9 158 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 WDR89Q96FK6 387 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 FOPNLQ96NB1 174 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SEC22CQ9BRL7 303 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF416Q9BWM5 594 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SHARPINQ9H0F6 387 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 DYRK1BQ9Y463 629 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 VNN2O95498 520 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 IGSF6O95976 241 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ZDHHC11BP0C7U3 371 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 RBMS1P29558 406 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 AHRP35869 848 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 VEGFCP49767 419 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 PLD1Q13393 1074 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 DUSP6Q16828 381 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 POM121L1PQ3SYA9 428 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ATRAIDQ6UW56 229 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 SLCO4C1Q6ZQN7 724 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 LRRTM4Q86VH4 590 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 CBARPQ8N350 705 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 BTBD1Q9H0C5 482 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 MED20Q9H944 212 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 CD93Q9NPY3 652 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF69Q9UC07 566 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 POMT2Q9UKY4 750 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 COPS3Q9UNS2 423 aa10.85□□□□□ -0.67
HMGCS1-202ENST00000433297 A0A087WUU8 490 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 HMGN4O00479 90 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 CASC3O15234 703 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC16A5O15375 505 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 ARPC5O15511 151 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 SIX6O95475 246 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 TBXA2RP21731 343 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 TRIM23P36406 574 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 GPR4P46093 362 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 TBPL1P62380 186 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 GPR17Q13304 367 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 HSD17B12Q53GQ0 312 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 RTP2Q5QGT7 225 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 MEIOBQ8N635 442 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 OR10H4Q8NGA5 316 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 BRI3BPQ8WY22 251 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 HGDQ93099 445 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 RFKQ969G6 155 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 ORAI3Q9BRQ5 295 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 FUZQ9BT04 418 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 TMEM168Q9H0V1 697 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 ISYNA1Q9NPH2 558 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 WASH6PQ9NQA3 447 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 DMRT3Q9NQL9 472 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 CLEC4EQ9ULY5 219 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 A0A0C4DFX4 3053 aa10.84□□□□□ -0.67
HMGCS1-202ENST00000433297 TRABD2BA6NFA1 517 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms