RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 TSPAN8P19075 237 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 HK1P19367 917 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 MPIP34949 423 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 HSD17B3P37058 310 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 SIRPAP78324 504 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 OCRLQ01968 901 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 CLCQ05315 142 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 SPIN4Q56A73 249 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 ZNF572Q7Z3I7 529 aaPredicted RBP13.42□□□□□ -0.26
PRKDC-203ENST00000432581 RELL1Q8IUW5 271 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 CDYL2Q8N8U2 506 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 OR2M3Q8NG83 312 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 FIG4Q92562 907 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 PERPQ96FX8 193 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 MARK4Q96L34 752 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 PAFAH2Q99487 392 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 PIGQQ9BRB3 760 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 PINK1Q9BXM7 581 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 GSX2Q9BZM3 304 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 DSN1Q9H410 356 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 PTGES2Q9H7Z7 377 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 CSPG4Q6UVK1 2322 aa13.42□□□□□ -0.26
PRKDC-203ENST00000432581 SMAD7O15105 426 aaKnown RBP13.41□□□□□ -0.26
PRKDC-203ENST00000432581 SCO2O43819 266 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 ULK1O75385 1050 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 NME6O75414 186 aaPredicted RBP13.41□□□□□ -0.26
PRKDC-203ENST00000432581 SLITRK5O94991 958 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 FCGR2AP12318 317 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 GSTM5P46439 218 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 CLDN15P56746 228 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 RPS3AP61247 264 aaKnown RBP13.41□□□□□ -0.26
PRKDC-203ENST00000432581 PPP2R2BQ00005 443 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 ACSM2AQ08AH3 577 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 ZNF155Q12901 538 aaPredicted RBP13.41□□□□□ -0.26
PRKDC-203ENST00000432581 CYP27C1Q4G0S4 372 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 ACSM2BQ68CK6 577 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 C8orf74Q6P047 294 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 PRIMA1Q86XR5 153 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 MED12LQ86YW9 2145 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 OR7G2Q8NG99 324 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 OR4N2Q8NGD1 307 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 UHMK1Q8TAS1 419 aaKnown RBP13.41□□□□□ -0.26
PRKDC-203ENST00000432581 GFM2Q969S9 779 aaKnown RBP13.41□□□□□ -0.26
PRKDC-203ENST00000432581 ZNF382Q96SR6 550 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 TSPYL1Q9H0U9 437 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 PROCRQ9UNN8 238 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 ZNF337Q9Y3M9 751 aa13.41□□□□□ -0.26
PRKDC-203ENST00000432581 A0A087WV62 115 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 OR2M5A3KFT3 312 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 C17orf51A8MQB3 221 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 SEC14L5O43304 696 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 FADS1O60427 444 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 SBK3P0C264 359 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 PPP3CBP16298 524 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 TAC1P20366 129 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 PCSK6P29122 969 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 HMOX2P30519 316 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 TIA1P31483 386 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 CLK3P49761 638 aaKnown RBP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 RAE1P78406 368 aaKnown RBP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 PSG6Q00889 435 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 PON3Q15166 354 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 DECR1Q16698 335 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 GLYR1Q49A26 553 aaPredicted RBP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 TCHHL1Q5QJ38 904 aaPredicted RBP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 UBAP2Q5T6F2 1119 aaKnown RBP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 GALNT18Q6P9A2 607 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 GPRIN3Q6ZVF9 776 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 ZNF550Q7Z398 422 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 TMEM151AQ8N4L1 468 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 METTL25Q8N6Q8 603 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 ZNF610Q8N9Z0 462 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 PPP1R14CQ8TAE6 165 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 FNDC9Q8TBE3 224 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 METTL6Q8TCB7 284 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 C16orf78Q8WTQ4 265 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 ZC3HAV1LQ96H79 300 aaKnown RBP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 HS3ST6Q96QI5 342 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 BBS4Q96RK4 519 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 ACPTQ9BZG2 426 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 FAM120CQ9NX05 1096 aaKnown RBP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 MED11Q9P086 117 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 ZNF180Q9UJW8 692 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 MRTO4Q9UKD2 239 aaKnown RBP13.4□□□□□ -0.26
PRKDC-203ENST00000432581 STK38LQ9Y2H1 464 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 AP4B1Q9Y6B7 739 aa13.4□□□□□ -0.26
PRKDC-203ENST00000432581 CCDC151A5D8V7 595 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 TRIM64A6NGJ6 449 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 TRIM64BA6NI03 449 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 TRIM49D1C9J1S8 452 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 H0YC42 278 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 H3BML4 177 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 TMCC2O75069 709 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 SUPT7LO94864 414 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 CTAGE8P0CG41 777 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 CHN1P15882 459 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 DDCP20711 480 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 TBXA2RP21731 343 aa13.39□□□□□ -0.27
PRKDC-203ENST00000432581 LOXP28300 417 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms