RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CBR3O75828 277 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 TNFSF13O75888 250 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 TMIGD3P0DMS9 266 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-202ENST00000430200 CPA3P15088 417 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 KRT4P19013 534 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 PRPH2P23942 346 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 IL12BP29460 328 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 MAP3K8P41279 467 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 SLC18A2Q05940 514 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 HSPB3Q12988 150 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 GAB1Q13480 694 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 IMPG1Q17R60 797 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 KANK2Q63ZY3 851 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 CDC20BQ86Y33 519 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 LINC01560Q8TB33 94 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 ZPLD1Q8TCW7 415 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 PIK3R3Q92569 461 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 ELP4Q96EB1 424 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 GIMAP5Q96F15 307 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 BBS4Q96RK4 519 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 POLDIP3Q9BY77 421 aaKnown RBP10.66□□□□□ -0.7
HDAC4-202ENST00000430200 CLEC4MQ9H2X3 399 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-202ENST00000430200 EQTNQ9NQ60 294 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 MIEF1Q9NQG6 463 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 CCM2LQ9NUG4 571 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-202ENST00000430200 TAS2R7Q9NYW3 318 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 SENP1Q9P0U3 644 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 ZNF629Q9UEG4 869 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-202ENST00000430200 PLEKHA6Q9Y2H5 1048 aa10.66□□□□□ -0.7
HDAC4-202ENST00000430200 NAV3Q8IVL0 2385 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 LSM1O15116 133 aaKnown RBP10.65□□□□□ -0.7
HDAC4-202ENST00000430200 GMFGO60234 142 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 ABCB7O75027 752 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 CDH16O75309 829 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 IL2RAP01589 272 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 ACP2P11117 423 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 CREB1P16220 341 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 CTSSP25774 331 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 DPP4P27487 766 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 DGKQP52824 942 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 SUCLG1P53597 346 aaKnown RBP10.65□□□□□ -0.7
HDAC4-202ENST00000430200 PNLIPRP2P54317 469 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 CLDN20P56880 219 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 VSNL1P62760 191 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 RPL38P63173 70 aaKnown RBP10.65□□□□□ -0.7
HDAC4-202ENST00000430200 PDE7AQ13946 482 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 EFR3AQ14156 821 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 GRAMD1BQ3KR37 738 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 UGT3A2Q3SY77 523 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 CCDC153Q494R4 210 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 RFTN2Q52LD8 501 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-202ENST00000430200 LIPMQ5VYY2 423 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 VWA1Q6PCB0 445 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 ZCCHC23Q6ZST2 131 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 LUZP2Q86TE4 346 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 MARCH3Q86UD3 253 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 EXOC3L1Q86VI1 746 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 FIG4Q92562 907 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 HOXB13Q92826 284 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-202ENST00000430200 INTS12Q96CB8 462 aaKnown RBP10.65□□□□□ -0.7
HDAC4-202ENST00000430200 TMCO6Q96DC7 493 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 CCDC126Q96EE4 140 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 SFXN2Q96NB2 322 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 TSSK3Q96PN8 268 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 LMF2Q9BU23 707 aaKnown RBP10.65□□□□□ -0.7
HDAC4-202ENST00000430200 CXXC4Q9H2H0 198 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 DSN1Q9H410 356 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 CALHM2Q9HA72 323 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 GIMAP4Q9NUV9 329 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 DDX18Q9NVP1 670 aaKnown RBP10.65□□□□□ -0.7
HDAC4-202ENST00000430200 FBXO34Q9NWN3 711 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 TAS2R9Q9NYW1 312 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 MED11Q9P086 117 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 BAIAP2L1Q9UHR4 511 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 ST6GALNAC2Q9UJ37 374 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 DKKL1Q9UK85 242 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 OR10H1Q9Y4A9 318 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 DNAJC15Q9Y5T4 150 aa10.65□□□□□ -0.7
HDAC4-202ENST00000430200 A0A1W2PNV4 684 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 OR2M5A3KFT3 312 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 COPEO14579 308 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 AZIN1O14977 448 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 AKAP10O43572 662 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 COQ9O75208 318 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 BCAS2O75934 225 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-202ENST00000430200 LINC00032P0C843 101 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 UROSP10746 265 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 ALDH3A1P30838 453 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 NTSP30990 170 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 MPIP34949 423 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 FRKP42685 505 aaPredicted RBP10.64□□□□□ -0.71
HDAC4-202ENST00000430200 RFX3P48380 749 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 RCAN2Q14206 197 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 POU4F3Q15319 338 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 EXOSC6Q5RKV6 272 aaKnown RBP10.64□□□□□ -0.71
HDAC4-202ENST00000430200 IKBIPQ70UQ0 350 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 GGNQ86UU5 652 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 TRABD2AQ86V40 505 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 KRTAP1-3Q8IUG1 177 aa10.64□□□□□ -0.71
HDAC4-202ENST00000430200 UBQLNLQ8IYU4 475 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms