RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 ITGB7P26010 798 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 ACOT6Q3I5F7 207 aaPredicted RBP7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 TMEM41BQ5BJD5 291 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 CES4AQ5XG92 561 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 KDM4DQ6B0I6 523 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 C19orf35Q6ZS72 473 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF614Q8N883 585 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 FBXO27Q8NI29 283 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 TRIM43Q96BQ3 446 aaPredicted RBP7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 BSCL2Q96G97 398 aaPredicted RBP7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 PKMYT1Q99640 499 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 STRA6Q9BX79 667 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 PCBD2Q9H0N5 130 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 MVB12BQ9H7P6 319 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 BRD7Q9NPI1 651 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 CHRNA9Q9UGM1 479 aa7.16□□□□□ -1.26
SYNPO2-202ENST00000429713 ANKRD61A6NGH8 418 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 A8MT66 165 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 IL5P05113 134 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 BMI1P35226 326 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 SNRPD1P62314 119 aaKnown RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 OLIG2Q13516 323 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 DUOXA1Q1HG43 343 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 GDPD3Q7L5L3 318 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 MON1AQ86VX9 555 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 OR52N1Q8NH53 320 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 SLC5A11Q8WWX8 675 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF629Q9UEG4 869 aaPredicted RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 PSAT1Q9Y617 370 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 ACOD1A6NK06 481 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 KDELR3O43731 214 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 UGDHO60701 494 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 METTL15P1P0C7V9 234 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 FSHRP23945 695 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 GADD45AP24522 165 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 LIMK1P53667 647 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 PXKQ7Z7A4 578 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 OR4Q3Q8NH05 313 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 TMEM18Q96B42 140 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 PGAP3Q96FM1 320 aaPredicted RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 ESRP2Q9H6T0 727 aaKnown RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 TMLHEQ9NVH6 421 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 SMIM35A0A1B0GVV1 85 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 B4DEV8 164 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 CATP04040 527 aaKnown RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 MTNR1BP49286 362 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 P4HA3Q7Z4N8 544 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF467Q7Z7K2 595 aaPredicted RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 STK35Q8TDR2 534 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 LPPQ93052 612 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 OTUB2Q96DC9 234 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 YIPF6Q96EC8 236 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 SEC11CQ9BY50 192 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF225Q9UK10 706 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 SLC7A11Q9UPY5 501 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 CLCA3PQ9Y6N3 262 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 GVINP1Q7Z2Y8 2422 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 NEMP2A6NFY4 417 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 I6L893 689 aaPredicted RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 PHOX2AO14813 284 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 RBBP9O75884 186 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 SERPINA5P05154 406 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 GABRR1P24046 479 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 DLSTP36957 453 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 BUD31P41223 144 aaPredicted RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 RFX3P48380 749 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 MRPS6P82932 125 aaKnown RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 DSC2Q02487 901 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 ADGRG2Q8IZP9 1017 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 SFXN2Q96NB2 322 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 MOB1AQ9H8S9 216 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 PIGVQ9NUD9 493 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 ERVK13-1Q9NX77 482 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 EIF2B4Q9UI10 523 aaKnown RBP7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 ASB1Q9Y576 335 aa7.15□□□□□ -1.26
SYNPO2-202ENST00000429713 LOC105371267A0A1B0GV96 52 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 SYT7O43581 403 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 CLIC3O95833 236 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 FGBP02675 491 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 SPP1P10451 314 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 FGF9P31371 208 aaPredicted RBP7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 AFF3P51826 1226 aaKnown RBP7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 MANFP55145 182 aaKnown RBP7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 SP2Q02086 613 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 TAZQ16635 292 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 COX19Q49B96 90 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 IFNLR1Q8IU57 520 aaPredicted RBP7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 TMIGD2Q96BF3 282 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 SPIN2AQ99865 258 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 SPIN2BQ9BPZ2 258 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 IPPKQ9H8X2 491 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 SIRT7Q9NRC8 400 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 VAPAQ9P0L0 249 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 DCTP40126 519 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 KHKP50053 298 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 MLLT10P55197 1068 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 ADPRMQ3LIE5 342 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 OR10K2Q6IF99 312 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 CILP2Q8IUL8 1156 aa7.15□□□□□ -1.27
SYNPO2-202ENST00000429713 HSD17B11Q8NBQ5 300 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms