RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 MAGEB17A8MXT2 336 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 TO15178 435 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SH3BGRLO75368 114 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 STX11O75558 287 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 MED26O95402 600 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ETHE1O95571 254 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 TPOP07202 933 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SRFP11831 508 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 CD36P16671 472 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SDC1P18827 310 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 FASP25445 335 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 PTBP1P26599 531 aaKnown RBP eCLIP12.68□□□□□ -0.38
SENP3-202ENST00000429205 ACTR1AP61163 376 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 HSF2Q03933 536 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 FOXM1Q08050 763 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ALKBH1Q13686 389 aaKnown RBP12.68□□□□□ -0.38
SENP3-202ENST00000429205 TCEA2Q15560 299 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SPANXN4Q5MJ08 99 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 RABEPKQ7Z6M1 372 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ANKRD46Q86W74 232 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 AQP12AQ8IXF9 295 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SVOPLQ8N434 492 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 AKR7LQ8NHP1 331 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SLC5A11Q8WWX8 675 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 FAM122AQ96E09 287 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 TSSK3Q96PN8 268 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 INSM2Q96T92 566 aaPredicted RBP12.68□□□□□ -0.38
SENP3-202ENST00000429205 CLMPQ9H6B4 373 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 PRM3Q9NNZ6 103 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 NIT2Q9NQR4 276 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 VPS29Q9UBQ0 182 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SLC23A1Q9UHI7 598 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 OSGIN1Q9UJX0 560 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ADAM30Q9UKF2 790 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 KCNMB2Q9Y691 235 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 TOX3O15405 576 aaPredicted RBP12.68□□□□□ -0.38
SENP3-202ENST00000429205 RPN2P04844 631 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 KLK3P07288 261 aaPredicted RBP12.68□□□□□ -0.38
SENP3-202ENST00000429205 SBK2P0C263 348 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ACSM4P0C7M7 580 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ELK4P28324 431 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ADARB1P78563 741 aaKnown RBP12.68□□□□□ -0.38
SENP3-202ENST00000429205 MEF2AQ02078 507 aaPredicted RBP12.68□□□□□ -0.38
SENP3-202ENST00000429205 TDGQ13569 410 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SLBPQ14493 270 aaKnown RBP eCLIP12.68□□□□□ -0.38
SENP3-202ENST00000429205 TEAD4Q15561 434 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 MLF2Q15773 248 aaPredicted RBP12.68□□□□□ -0.38
SENP3-202ENST00000429205 TPRG1LQ5T0D9 272 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ATG9BQ674R7 924 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 NOXRED1Q6NXP6 359 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 MED27Q6P2C8 311 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 DLEU7Q6UYE1 221 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ZNF574Q6ZN55 896 aaPredicted RBP12.68□□□□□ -0.38
SENP3-202ENST00000429205 SPPL2CQ8IUH8 684 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 PGBD3Q8N328 593 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 OR56B2PQ8NGI1 322 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 ST7LQ8TDW4 575 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 TMEM125Q96AQ2 219 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 WDR34Q96EX3 536 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 C12orf66Q96MD2 445 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 TMEM74Q96NL1 305 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 OCSTAMPQ9BR26 566 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 MENTQ9BUN1 341 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 EBPLQ9BY08 206 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 CA14Q9ULX7 337 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 PCDHA9Q9Y5H5 950 aa12.68□□□□□ -0.38
SENP3-202ENST00000429205 PRR19A6NJB7 356 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 RHPN2P1A8MT19 583 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 ZNF879B4DU55 563 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 EIF3GO75821 320 aaKnown RBP eCLIP12.67□□□□□ -0.38
SENP3-202ENST00000429205 RECKO95980 971 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 THEGLP0DJG4 465 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 C1GALT1C1LP0DN25 315 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 ERGP11308 486 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 BMI1P35226 326 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
SENP3-202ENST00000429205 CLDN8P56748 225 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 EPS8Q12929 822 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 ASAH1Q13510 395 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 SF1Q15637 639 aaKnown RBP12.67□□□□□ -0.38
SENP3-202ENST00000429205 ZIK1Q3SY52 487 aaPredicted RBP12.67□□□□□ -0.38
SENP3-202ENST00000429205 PRAMEF14Q5SWL7 426 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 PRAMEF13Q5VWM6 474 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 C1orf122Q6ZSJ8 110 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 PGAP1Q75T13 922 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 DPPA2Q7Z7J5 298 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 TRIM69Q86WT6 500 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 DMRTC2Q8IXT2 367 aaPredicted RBP12.67□□□□□ -0.38
SENP3-202ENST00000429205 ENTHD1Q8IYW4 607 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 HLA-CQ95604 372 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 SCARF2Q96GP6 870 aaPredicted RBP12.67□□□□□ -0.38
SENP3-202ENST00000429205 BMFQ96LC9 184 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 CARS2Q9HA77 564 aaKnown RBP12.67□□□□□ -0.38
SENP3-202ENST00000429205 IMP3Q9NV31 184 aaKnown RBP12.67□□□□□ -0.38
SENP3-202ENST00000429205 NDUFAF4Q9P032 175 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 RAPGEFL1Q9UHV5 662 aa12.67□□□□□ -0.38
SENP3-202ENST00000429205 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
SENP3-202ENST00000429205 PRSS38A1L453 326 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms