RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MED28Q9H204 178 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 ENTPD4Q9Y227 616 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 RASD1Q9Y272 281 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 ANKRD61A6NGH8 418 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 AKAP8O43823 692 aaKnown RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 GRPRP30550 384 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 BSGP35613 385 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 MEDAGQ5VYS4 303 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 C12orf73Q69YU5 71 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 ANKRD54Q6NXT1 300 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 ZNF793Q6ZN11 406 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 GOT1L1Q8NHS2 421 aaPredicted RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 PXYLP1Q8TE99 480 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 DTD2Q96FN9 168 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 MSANTD3Q96H12 275 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 LRRC3BQ96PB8 259 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 SLC35C2Q9NQQ7 365 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 ZC4H2Q9NQZ6 224 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 USP36Q9P275 1121 aaKnown RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 MGAT4AQ9UM21 535 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 DIMT1Q9UNQ2 313 aaKnown RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 CHST2Q9Y4C5 530 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 TNFRSF10AO00220 468 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 FOXE1O00358 373 aaPredicted RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 RGS13O14921 159 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 SMAD9O15198 467 aaKnown RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 PRODHO43272 600 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 ZNF780AO75290 641 aaPredicted RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 IL1AP01583 271 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 PTHLHP12272 177 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 HOXD10P28358 340 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 SLC7A9P82251 487 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 PDE7AQ13946 482 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 CAMKMTQ7Z624 323 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 OR4Q3Q8NH05 313 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 CXorf40AQ8TE69 158 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 RGMAQ96B86 450 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 MAN2C1Q9NTJ4 1040 aa11.71□□□□□ -0.54
CDH3-202ENST00000429102 SIRT4Q9Y6E7 314 aaPredicted RBP11.71□□□□□ -0.54
CDH3-202ENST00000429102 FAM171A2A8MVW0 826 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 E9PI62 339 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 ORC5O43913 435 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 HRGP04196 525 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 BTN3A2P78410 334 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 ABATP80404 500 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 SIM1P81133 766 aaPredicted RBP11.7□□□□□ -0.54
CDH3-202ENST00000429102 AGERQ15109 404 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 OTPQ5XKR4 325 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 CPXM2Q8N436 756 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 ARL14Q8N4G2 192 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 ZNF433Q8N7K0 673 aaPredicted RBP11.7□□□□□ -0.54
CDH3-202ENST00000429102 GDPD1Q8N9F7 314 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 SLC16A11Q8NCK7 471 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 SETD6Q8TBK2 473 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 ADAMTS15Q8TE58 950 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 UBE2E3Q969T4 207 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 MAP6Q96JE9 813 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 AMDHD1Q96NU7 426 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 ZNF559Q9BR84 538 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 ORAI3Q9BRQ5 295 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 SGPP1Q9BX95 441 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 GPR174Q9BXC1 333 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 DAPL1A0PJW8 107 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 QSOX1O00391 747 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 SSNA1O43805 119 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 EPPINO95925 133 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 AGFG1P52594 562 aaKnown RBP11.7□□□□□ -0.54
CDH3-202ENST00000429102 ASAH1Q13510 395 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 ODF4Q2M2E3 257 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 GXYLT1Q4G148 440 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 WDR45BQ5MNZ6 344 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 MPP7Q5T2T1 576 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 OR4M1Q8NGD0 313 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 MS4A8Q9BY19 250 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 CERS4Q9HA82 394 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 RBFOX1Q9NWB1 397 aaKnown RBP11.7□□□□□ -0.54
CDH3-202ENST00000429102 SCN5AQ14524 2016 aa11.7□□□□□ -0.54
CDH3-202ENST00000429102 CENPVL1A0A0U1RR11 272 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SCO2O43819 266 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 PRKNO60260 465 aaPredicted RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 OLFM2O95897 454 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SOD1P00441 154 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 TP53P04637 393 aaPredicted RBP11.69□□□□□ -0.54
CDH3-202ENST00000429102 ACP2P11117 423 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 PRG2P13727 222 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 CPEP16870 476 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 PTPN2P17706 415 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SMIM11AP58511 58 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SLC9A5Q14940 896 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 DHCR24Q15392 516 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 TOR1AIP1Q5JTV8 583 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 FIGNL1Q6PIW4 674 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 CEACAM19Q7Z692 300 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 GPR135Q8IZ08 494 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 SIRT6Q8N6T7 355 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 TMEM99Q8N816 258 aa11.69□□□□□ -0.54
CDH3-202ENST00000429102 TMEM163Q8TC26 289 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms