RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 MTDHQ86UE4 582 aaKnown RBP13.37□□□□□ -0.27
SGCE-204ENST00000428696 PACS2Q86VP3 889 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 GTF2H4Q92759 462 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 AURKBQ96GD4 344 aaPredicted RBP13.37□□□□□ -0.27
SGCE-204ENST00000428696 BTBD2Q9BX70 525 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 SERHLQ9NQF3 203 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 OLAHQ9NV23 265 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.37□□□□□ -0.27
SGCE-204ENST00000428696 NPIPA1Q9UND3 350 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 PCDHGB6Q9Y5F9 930 aa13.37□□□□□ -0.27
SGCE-204ENST00000428696 DUXAA6NLW8 204 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 TFECO14948 347 aaPredicted RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 SCO2O43819 266 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 GMFGO60234 142 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 SNX3O60493 162 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 CDC40O60508 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
SGCE-204ENST00000428696 TSPAN2O60636 221 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 UTS2O95399 124 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 IL33O95760 270 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 IGKV1D-16P01601 117 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 ZNF24P17028 368 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 CASP3P42574 277 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 MRPL19P49406 292 aaKnown RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 CLK3P49761 638 aaKnown RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 KHKP50053 298 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 ANXA11P50995 505 aaKnown RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 PNLIPRP2P54317 469 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 PSPHP78330 225 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 STX5Q13190 355 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.36□□□□□ -0.277e-15■■□□□ 14.4
SGCE-204ENST00000428696 SAXO2Q658L1 398 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 OR5M10Q6IEU7 315 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 MSANTD1Q6ZTZ1 278 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 FBXW8Q8N3Y1 598 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 GOT1L1Q8NHS2 421 aaPredicted RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 FAR1Q8WVX9 515 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 NEURL3Q96EH8 262 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 G6PC3Q9BUM1 346 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 DEFB127Q9H1M4 99 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 ZNF385DQ9H6B1 395 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 GALNT9Q9HCQ5 603 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 DUSP22Q9NRW4 184 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 EXD2Q9NVH0 621 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 FBXO34Q9NWN3 711 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 TUBA8Q9NY65 449 aaPredicted RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 FAM53CQ9NYF3 392 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 FLRT3Q9NZU0 649 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 SLAMF8Q9P0V8 285 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 LEF1Q9UJU2 399 aaPredicted RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 ADAM21Q9UKJ8 722 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 CNOT11Q9UKZ1 510 aaKnown RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 BOKQ9UMX3 212 aaPredicted RBP13.36□□□□□ -0.27
SGCE-204ENST00000428696 PCDHB14Q9Y5E9 798 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 CAPN7Q9Y6W3 813 aa13.36□□□□□ -0.27
SGCE-204ENST00000428696 CPAMD8Q8IZJ3 1885 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 COL6A6A6NMZ7 2263 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 CFAP46Q8IYW2 2715 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 A0A096LPI6 279 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 ASPDHA6ND91 283 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 PRAMEF25A6NGN4 478 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 ACOT7O00154 380 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 GNB5O14775 395 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 ICOSLGO75144 302 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 RNF144AP50876 292 aaPredicted RBP13.35□□□□□ -0.27
SGCE-204ENST00000428696 NFYCQ13952 458 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 INAQ16352 499 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 GPAT3Q53EU6 434 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 COX20Q5RI15 118 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 DCST2Q5T1A1 773 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 DNAJB8Q8NHS0 232 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 HGDQ93099 445 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 FRMD6Q96NE9 622 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 CCT8L2Q96SF2 557 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 STACQ99469 402 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 TBL1XR1Q9BZK7 514 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 PAIP1Q9H074 479 aaKnown RBP13.35□□□□□ -0.27
SGCE-204ENST00000428696 SERHL2Q9H4I8 314 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 EXO5Q9H790 373 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 TPT1P8Q9HAU6 139 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 MRGBPQ9NV56 204 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 TMEM45AQ9NWC5 275 aa13.35□□□□□ -0.27
SGCE-204ENST00000428696 NUP214P35658 2090 aaPredicted RBP13.35□□□□□ -0.27
SGCE-204ENST00000428696 CLIC1O00299 241 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 TRAPPC6AO75865 159 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 SNX4O95219 450 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 ETFAP13804 333 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 MAP3K8P41279 467 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 MAN2A2P49641 1150 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 CYLC2Q14093 348 aaPredicted RBP13.34□□□□□ -0.27
SGCE-204ENST00000428696 ELOAQ14241 798 aaKnown RBP13.34□□□□□ -0.27
SGCE-204ENST00000428696 MAPRE2Q15555 327 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 GPR68Q15743 365 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 GRAMD1BQ3KR37 738 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 RNFT1Q5M7Z0 435 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 TBCELQ5QJ74 424 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 OLIG3Q7RTU3 272 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 MARCH3Q86UD3 253 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 SNX32Q86XE0 403 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 ZNF614Q8N883 585 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms