RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 AFF4Q9UHB7 1163 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 TRAV1-2A0A0B4J238 106 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 LZTS3O60299 673 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 NBNO60934 754 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 FZD7O75084 574 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 EGFP01133 1207 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ANXA5P08758 320 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SPI1P17947 270 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 DGKAP23743 735 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 AKAP5P24588 427 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 AQP1P29972 269 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 PRKAR1BP31321 381 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 RPL3P39023 403 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 PTPN5P54829 565 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SYTL3Q4VX76 610 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TIGD5Q53EQ6 642 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 IGSF11Q5DX21 431 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ATXN7L2Q5T6C5 722 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 CD300LGQ6UXG3 332 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TRMT11Q7Z4G4 463 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 CTU1Q7Z7A3 348 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 ADGRG2Q8IZP9 1017 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SCARB1Q8WTV0 552 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SLC38A5Q8WUX1 472 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 APOLD1Q96LR9 279 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ZNF354BQ96LW1 612 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TREX2Q9BQ50 279 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 DPCDQ9BVM2 203 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 IFT27Q9BW83 186 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 MCCC2Q9HCC0 563 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 MYOZ1Q9NP98 299 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 A4GNTQ9UNA3 340 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ARHGAP32A7KAX9 2087 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TRABD2BA6NFA1 517 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 M0R129 80 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 PDCD5O14737 125 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 CASKO14936 926 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TBX19O60806 448 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 FURINP09958 794 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 RPA2P15927 270 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TNFRSF1BP20333 461 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SEC61A1P61619 476 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 BCL2L1Q07817 233 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 IL18Q14116 193 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 GRM7Q14831 915 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 OR2G6Q5TZ20 316 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 C12orf40Q86WS4 652 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ZNF687Q8N1G0 1237 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ACBD7Q8N6N7 88 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 MDGA1Q8NFP4 955 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 RFKQ969G6 155 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TMEM203Q969S6 136 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 BHLHE41Q9C0J9 482 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 ZMYM5Q9UJ78 669 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 PLEKHM1Q9Y4G2 1056 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 PCDHB9Q9Y5E1 797 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 OR51B4Q9Y5P0 310 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TCRBV16S1A1N1A0A5B0 115 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 FAAHO00519 579 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 GABRPO00591 440 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SLC19A2O60779 497 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 LPLP06858 475 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 OPRD1P41143 372 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 OR1E2P47887 323 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SMSP52788 366 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 PSMD4P55036 377 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 CAV3P56539 151 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 COX20Q5RI15 118 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 HENMT1Q5T8I9 393 aaKnown RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 LINGO4Q6UY18 593 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 OR52J3Q8NH60 311 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ZNF251Q9BRH9 671 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 TSSK6Q9BXA6 273 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 GPR62Q9BZJ7 368 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 FAM117AQ9C073 453 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 SPHK1Q9NYA1 384 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 GPR160Q9UJ42 338 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 COL4A3Q01955 1670 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 MEIS3P2A8K0S8 358 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 BLOC1S5-TXNDC5H3BN57 136 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 NPC1O15118 1278 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 RAB36O95755 333 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 CD160O95971 181 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ITGALP20701 1170 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 MAPK9P45984 424 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 RABIFP47224 123 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 CAPZA2P47755 286 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 CCR9P51686 369 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 XKP51811 444 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 HLXQ14774 488 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 DUSP28Q4G0W2 176 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 KLBQ86Z14 1044 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 GANCQ8TET4 914 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 IGSF8Q969P0 613 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 ZNF582Q96NG8 517 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 MS4A7Q9GZW8 240 aaPredicted RBP4.83□□□□□ -1.64
RIF1-203ENST00000428287 EXTL2Q9UBQ6 330 aa4.83□□□□□ -1.64
RIF1-203ENST00000428287 FAM74A7A6NL05 159 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 TLX2O43763 284 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 B3GAT3O94766 335 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms