RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 BHLHB9Q6PI77 547 aa10□□□□□ -0.81
CUX1-205ENST00000425244 CCBE1Q6UXH8 406 aaPredicted RBP10□□□□□ -0.81
CUX1-205ENST00000425244 UTS2BQ765I0 119 aa10□□□□□ -0.81
CUX1-205ENST00000425244 VRK2Q86Y07 508 aa10□□□□□ -0.81
CUX1-205ENST00000425244 TMEFF1Q8IYR6 380 aa10□□□□□ -0.81
CUX1-205ENST00000425244 WDFY3Q8IZQ1 3526 aa10□□□□□ -0.81
CUX1-205ENST00000425244 ESX1Q8N693 406 aa10□□□□□ -0.81
CUX1-205ENST00000425244 OR2L3Q8NG85 312 aa10□□□□□ -0.81
CUX1-205ENST00000425244 OR52I1Q8NGK6 324 aa10□□□□□ -0.81
CUX1-205ENST00000425244 OR2L8Q8NGY9 312 aa10□□□□□ -0.81
CUX1-205ENST00000425244 GPR151Q8TDV0 419 aa10□□□□□ -0.81
CUX1-205ENST00000425244 COL26A1Q96A83 441 aa10□□□□□ -0.81
CUX1-205ENST00000425244 PRRC1Q96M27 445 aa10□□□□□ -0.81
CUX1-205ENST00000425244 WDR92Q96MX6 357 aa10□□□□□ -0.81
CUX1-205ENST00000425244 ZNF582Q96NG8 517 aaPredicted RBP10□□□□□ -0.81
CUX1-205ENST00000425244 NELL2Q99435 816 aa10□□□□□ -0.81
CUX1-205ENST00000425244 FUZQ9BT04 418 aa10□□□□□ -0.81
CUX1-205ENST00000425244 TOR4AQ9NXH8 423 aa10□□□□□ -0.81
CUX1-205ENST00000425244 SEC14L4Q9UDX3 406 aa10□□□□□ -0.81
CUX1-205ENST00000425244 MKLN1Q9UL63 735 aa10□□□□□ -0.81
CUX1-205ENST00000425244 RBMX2Q9Y388 322 aaKnown RBP10□□□□□ -0.81
CUX1-205ENST00000425244 ASB4Q9Y574 426 aa10□□□□□ -0.81
CUX1-205ENST00000425244 ARHGEF17Q96PE2 2063 aaPredicted RBP10□□□□□ -0.81
CUX1-205ENST00000425244 APBB3O95704 486 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 LGI1O95970 557 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 PTTG1O95997 202 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 APOA1P02647 267 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 FHP07954 510 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 MYL12AP19105 171 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 CSNK2A2P19784 350 aaPredicted RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 ETV5P41161 510 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 ACTR1BP42025 376 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 ETV1P50549 477 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 ANXA11P50995 505 aaKnown RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 ACTR1AP61163 376 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 BTN3A2P78410 334 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 RUNX1T1Q06455 604 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 HYAL2Q12891 473 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 MLC1Q15049 377 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 TJAP1Q5JTD0 557 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 ZNF730Q6ZMV8 503 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 GDPD3Q7L5L3 318 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 AKAP14Q86UN6 197 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 SLC22A18ASQ8N1D0 253 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 NANOGP1Q8N7R0 232 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 OR4E2Q8NGC2 313 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 TEX47Q8TBZ9 253 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 SLC9A6Q92581 669 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 BARHL1Q9BZE3 327 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 TCEAL2Q9H3H9 227 aaPredicted RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 PRDM7Q9NQW5 492 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 GIMAP4Q9NUV9 329 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 NDOR1Q9UHB4 597 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 STUB1Q9UNE7 303 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 SSR3Q9UNL2 185 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 GPR55Q9Y2T6 319 aaPredicted RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 UGT2A1Q9Y4X1 527 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 SPIN1Q9Y657 262 aaPredicted RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 SCN3AQ9NY46 2000 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 SPAG17Q6Q759 2223 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 PRAMEF26H0Y7S4 382 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 LRRTM2O43300 516 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 ZNF217O75362 1048 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 SLITRK5O94991 958 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 CDRT1O95170 752 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 RAB36O95755 333 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 EML2O95834 649 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 CH25HO95992 272 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 THEGLP0DJG4 465 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 CRYBB2P43320 205 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 CXCL12P48061 93 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 PRR5P85299 388 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 DMWDQ09019 674 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 SELENBP1Q13228 472 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 C1orf61Q13536 156 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 ZIC1Q15915 447 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 ATAD3BQ5T9A4 648 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 OR2G6Q5TZ20 316 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 RRM2BQ7LG56 351 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 C16orf62Q7Z3J2 963 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 CCDC190Q86UF4 302 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 KIF18BQ86Y91 864 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 PHC2Q8IXK0 858 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 UBALD2Q8IYN6 164 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 CELF2-AS1Q8N7Q2 184 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 MORN4Q8NDC4 146 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 NUP43Q8NFH3 380 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 PROKR2Q8NFJ6 384 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 OR2L5Q8NG80 312 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 OR56A1Q8NGH5 318 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 DOK4Q8TEW6 326 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 ZNF764Q96H86 408 aaPredicted RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 FAM46AQ96IP4 442 aaKnown RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 OR2M4Q96R27 311 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 OR7D2Q96RA2 312 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 POLDIP3Q9BY77 421 aaKnown RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 TBC1D29Q9UFV1 150 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 NTNG1Q9Y2I2 539 aa9.99□□□□□ -0.81
CUX1-205ENST00000425244 YARS2Q9Y2Z4 477 aaKnown RBP9.99□□□□□ -0.81
CUX1-205ENST00000425244 A0A087WUU8 490 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms