RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 FOPNLQ96NB1 174 aa13.46□□□□□ -0.26
MSH5-206ENST00000423982 DHRS9Q9BPW9 319 aa13.46□□□□□ -0.26
MSH5-206ENST00000423982 CDCP1Q9H5V8 836 aa13.46□□□□□ -0.26
MSH5-206ENST00000423982 TRPC4Q9UBN4 977 aa13.46□□□□□ -0.26
MSH5-206ENST00000423982 ACAD8Q9UKU7 415 aa13.46□□□□□ -0.26
MSH5-206ENST00000423982 SPEF1Q9Y4P9 236 aa13.46□□□□□ -0.26
MSH5-206ENST00000423982 WDR87Q6ZQQ6 2873 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 PPM1DO15297 605 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 MBTPS2O43462 519 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 KAT7O95251 611 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 STATHP02808 62 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 SRPRAP08240 638 aaKnown RBP13.45□□□□□ -0.26
MSH5-206ENST00000423982 SRP9P49458 86 aaKnown RBP13.45□□□□□ -0.26
MSH5-206ENST00000423982 ZNF155Q12901 538 aaPredicted RBP13.45□□□□□ -0.26
MSH5-206ENST00000423982 KLHL22Q53GT1 634 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 C2orf27AQ580R0 203 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 RNASE12Q5GAN4 147 aaKnown RBP13.45□□□□□ -0.26
MSH5-206ENST00000423982 VASNQ6EMK4 673 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 ZNF767PQ75MW2 155 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 SLC9B2Q86UD5 537 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 ARIH2OSQ8N7S6 290 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 ZNF485Q8NCK3 441 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 OR11H4Q8NGC9 324 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 ZFPM2Q8WW38 1151 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 SMAD5Q99717 465 aaKnown RBP13.45□□□□□ -0.26
MSH5-206ENST00000423982 EFCAB11Q9BUY7 163 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 UCKL1Q9NWZ5 548 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 TEX10Q9NXF1 929 aaPredicted RBP13.45□□□□□ -0.26
MSH5-206ENST00000423982 EXTL2Q9UBQ6 330 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 PRKAB1Q9Y478 270 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 COL4A3Q01955 1670 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 TMEM265A0A087WTH1 108 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 TMEM129A0AVI4 362 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 FEZF1A0PJY2 475 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 K7ESM1 405 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 PRODHO43272 600 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 SLC43A1O75387 559 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 SLC1A3P43003 542 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 PRLHRP49683 370 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 PRKAG1P54619 331 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 IDNKQ5T6J7 187 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 HIST2H2AA3Q6FI13 130 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 SLC30A6Q6NXT4 461 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 GLYATL1Q969I3 302 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.45□□□□□ -0.26
MSH5-206ENST00000423982 OR51I1Q9H343 314 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 OBP2AQ9NY56 170 aa13.45□□□□□ -0.26
MSH5-206ENST00000423982 NUMA1Q14980 2115 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 PDPK1O15530 556 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 SLC2A10O95528 541 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 ZNF250P15622 560 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 FGF9P31371 208 aaPredicted RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 VIPR1P32241 457 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 BUD31P41223 144 aaPredicted RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 ZNF234Q14588 700 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 SF3A2Q15428 464 aaKnown RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 FAM27D1Q5T7N8 215 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 ZDHHC20Q5W0Z9 365 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 CD200R1LQ6Q8B3 271 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 FAM92BQ6ZTR7 304 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 PRICKLE2Q7Z3G6 844 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 TRMT11Q7Z4G4 463 aaKnown RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 KLHDC8AQ8IYD2 350 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 OR8H3Q8N146 312 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 GHDCQ8N2G8 530 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 TBC1D19Q8N5T2 526 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 IL17RCQ8NAC3 791 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 OR6C4Q8NGE1 309 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 OTULINQ96BN8 352 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 TM4SF18Q96CE8 201 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 OMA1Q96E52 524 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 CPEB1Q9BZB8 566 aaKnown RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 PLXNA2O75051 1894 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 TCF20Q9UGU0 1960 aaKnown RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 GLOD5A6NK44 160 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 KPNA3O00505 521 aaPredicted RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 CHP2O43745 196 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 CTSLP07711 333 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 NR2F1P10589 423 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 DDCP20711 480 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 RPL3P39023 403 aaKnown RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 SMSP52788 366 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 RAB40BQ12829 278 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 PRPF38BQ5VTL8 546 aaKnown RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 TMEM91Q6ZNR0 172 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 MTSS1LQ765P7 747 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 KLBQ86Z14 1044 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 TRAPPC5Q8IUR0 188 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 TRAM1L1Q8N609 369 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 OR11H7Q8NGC8 314 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 SPRYD4Q8WW59 207 aaPredicted RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 SMPDL3AQ92484 453 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 AP2M1Q96CW1 435 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 FAM46AQ96IP4 442 aaKnown RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 SGPP1Q9BX95 441 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 ISG20L2Q9H9L3 353 aaKnown RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 FGF20Q9NP95 211 aaPredicted RBP13.44□□□□□ -0.26
MSH5-206ENST00000423982 EVA1BQ9NVM1 165 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 ZNF222Q9UK12 451 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms