RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 KHKP50053 298 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 TBC1D25Q3MII6 688 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 CCDC80Q76M96 950 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 RTL10Q7L3V2 364 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 PAQR7Q86WK9 346 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 HEATR5AQ86XA9 2040 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 POC5Q8NA72 575 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 ZNF566Q969W8 418 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 OR2A5Q96R48 311 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 TMED9Q9BVK6 235 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 C1QTNF7Q9BXJ2 289 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 HDHD5Q9BXW7 423 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 SAP130Q9H0E3 1048 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 DTX4Q9Y2E6 619 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 TRAV27A0A087WT01 109 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 CDC14CA4D256 554 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SLC9B1P1A6NJY1 282 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SNX4O95219 450 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 RPS19P39019 145 aaKnown RBP11.14□□□□□ -0.63
PTPRN-204ENST00000423636 GSTM5P46439 218 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 PRR5P85299 388 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 RGS1Q08116 209 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 FLYWCH1Q4VC44 716 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 Q6ZNX1 250 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 USP53Q70EK8 1073 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 OR8H2Q8N162 312 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 DEPDC4Q8N2C3 294 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 C1GALT1C1Q96EU7 318 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 COX4I2Q96KJ9 171 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SAMD8Q96LT4 415 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ZNF681Q96N22 645 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 CDADC1Q9BWV3 514 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 OR51V1Q9H2C8 321 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 CLEC4AQ9UMR7 237 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ERGIC3Q9Y282 383 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 C2orf92A0A1B0GVN3 265 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 PSMD9O00233 223 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 TP53P04637 393 aaPredicted RBP11.14□□□□□ -0.63
PTPRN-204ENST00000423636 CDH3P22223 829 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 DEFB133Q30KQ1 61 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 AMZ1Q400G9 498 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 PLAG1Q6DJT9 500 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 WDR88Q6ZMY6 472 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SLC46A3Q7Z3Q1 461 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 CADM2Q8N3J6 435 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 OR4K14Q8NGD5 310 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 RERGQ96A58 199 aaPredicted RBP11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ZNF559Q9BR84 538 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 NUAK2Q9H093 628 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ZNF576Q9H609 170 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 TIGARQ9NQ88 270 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 DZANK1Q9NVP4 752 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 KCNE5Q9UJ90 142 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SNX7Q9UNH6 387 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 MUC22E2RYF6 1773 aaPredicted RBP11.14□□□□□ -0.63
PTPRN-204ENST00000423636 C4orf47A7E2U8 309 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 FAM171A2A8MVW0 826 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SLC22A1O15245 554 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 EMC8O43402 210 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ADAM11O75078 769 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 LGI1O95970 557 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 MAOAP21397 527 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ALAS2P22557 587 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ACVR2AP27037 513 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 RPS7P62081 194 aaKnown RBP11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SYT14P1Q58G82 188 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 ZNF425Q6IV72 752 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 LRRC25Q8N386 305 aaPredicted RBP11.14□□□□□ -0.63
PTPRN-204ENST00000423636 MFSD9Q8NBP5 474 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 HPS1Q92902 700 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 DTNBP1Q96EV8 351 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 MESP1Q9BRJ9 268 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 SPATA9Q9BWV2 254 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 HMG20AQ9NP66 347 aa11.14□□□□□ -0.63
PTPRN-204ENST00000423636 TFECO14948 347 aaPredicted RBP11.13□□□□□ -0.63
PTPRN-204ENST00000423636 LALBAP00709 142 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 RPLP0P05388 317 aaKnown RBP11.13□□□□□ -0.63
PTPRN-204ENST00000423636 ACP2P11117 423 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
PTPRN-204ENST00000423636 HHEXQ03014 270 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 ENPP2Q13822 863 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 UBXN2BQ14CS0 331 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 PUS10Q3MIT2 529 aaKnown RBP11.13□□□□□ -0.63
PTPRN-204ENST00000423636 ZNF404Q494X3 552 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 MFSD4AQ8N468 514 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 OR51G2Q8NGK0 314 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 OPALINQ96PE5 141 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 HCAR1Q9BXC0 346 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 C3orf14Q9HBI5 128 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 HHATLQ9HCP6 504 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 ZNF346Q9UL40 294 aaKnown RBP11.13□□□□□ -0.63
PTPRN-204ENST00000423636 MAPRE3Q9UPY8 281 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 SOBPA7XYQ1 873 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 B3GALT2O43825 422 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 DRD2P14416 443 aa11.13□□□□□ -0.63
PTPRN-204ENST00000423636 HSD17B2P37059 387 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms