RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LIPT1Q9Y234 373 aa14.98□□□□□ -0.01
CHCHD3-202ENST00000423635 ZNF780BQ9Y6R6 833 aa14.98□□□□□ -0.01
CHCHD3-202ENST00000423635 H3BML4 177 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 OR7A17O14581 309 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 FADS1O60427 444 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 ADAM11O75078 769 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 SS18L1O75177 396 aaPredicted RBP14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 IGHV4-39P01824 125 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 GFAPP14136 432 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 EVI2BP34910 448 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 SLC6A8P48029 635 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 SGCBQ16585 318 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 NCMAPQ5T1S8 102 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 NPSR1Q6W5P4 371 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 COMMD6Q7Z4G1 85 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 OR5M1Q8NGP8 315 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 KLHL29Q96CT2 875 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 C11orf24Q96F05 449 aaPredicted RBP14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 CDK15Q96Q40 435 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 NTMT1Q9BV86 223 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 PTGES2Q9H7Z7 377 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 NOL11Q9H8H0 719 aaKnown RBP14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 ZBTB26Q9HCK0 441 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 SDHAF3Q9NRP4 125 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 RNF115Q9Y4L5 304 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 MAGED1Q9Y5V3 778 aaPredicted RBP14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 PCNX3Q9H6A9 2034 aa14.97□□□□□ -0.01
CHCHD3-202ENST00000423635 TRA2BP62995 288 aaKnown RBP14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 GALNT1Q10472 559 aaPredicted RBP14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 ACAP2Q15057 778 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 CTU2Q2VPK5 515 aaKnown RBP14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 C6orf52Q5T4I8 152 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 FAM180BQ6P0A1 224 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 C3orf62Q6ZUJ4 267 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 GGNQ86UU5 652 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 KLHL7Q8IXQ5 586 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 CCDC116Q8IYX3 515 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 CENPLQ8N0S6 344 aaPredicted RBP14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 SLC35F6Q8N357 371 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 OR4N2Q8NGD1 307 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 UHMK1Q8TAS1 419 aaKnown RBP14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 EFHD2Q96C19 240 aaPredicted RBP14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 C1GALT1C1Q96EU7 318 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 GRIP2Q9C0E4 1043 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 ANKRA2Q9H9E1 313 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 LRTM1Q9HBL6 345 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 GLRX2Q9NS18 164 aa14.96□□□□□ -0.01
CHCHD3-202ENST00000423635 SCO2O43819 266 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 GPRIN2O60269 458 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 NME6O75414 186 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 SIX3O95343 332 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 PLGP00747 810 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 CTAGE8P0CG41 777 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 CTBP2P56545 445 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 ZNF844Q08AG5 666 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 TMEM44Q2T9K0 475 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 PGGHGQ32M88 737 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 CCDC91Q7Z6B0 441 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 EXOC3L1Q86VI1 746 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 CTAGE4Q8IX94 777 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 STEAP2Q8NFT2 490 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 OR52B6Q8NGF0 335 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 KCTD4Q8WVF5 259 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 ATP6V1E2Q96A05 226 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 TACO1Q9BSH4 297 aaKnown RBP14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 FAIM2Q9BWQ8 316 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 HDHD5Q9BXW7 423 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 PRRG4Q9BZD6 226 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 RTN4RQ9BZR6 473 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 TRIM31Q9BZY9 425 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 FOLH1BQ9HBA9 442 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 BARX1Q9HBU1 254 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 PAQR5Q9NXK6 330 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 UTS2RQ9UKP6 389 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 CLEC4AQ9UMR7 237 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 SVEP1Q4LDE5 3571 aa14.95□□□□□ -0.02
CHCHD3-202ENST00000423635 A0A096LNT2 108 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 UQCRHLA0A096LP55 91 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 EIF3HO15372 352 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 NDUFS7O75251 213 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 CD3EP07766 207 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 GSTA2P09210 222 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 CCNG1P51959 295 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 IFT88Q13099 833 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 FAM83EQ2M2I3 478 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 ZNF672Q499Z4 452 aaPredicted RBP14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 TTC19Q6DKK2 380 aaPredicted RBP14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 STK32CQ86UX6 486 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 SLC44A2Q8IWA5 706 aaPredicted RBP14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 CTAGE3PQ8IX95 158 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 DUSP19Q8WTR2 217 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 NEUROG1Q92886 237 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 RHNO1Q9BSD3 238 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 ESRP2Q9H6T0 727 aaKnown RBP14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 STOML1Q9UBI4 398 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 ABCG2Q9UNQ0 655 aa14.94□□□□□ -0.02
CHCHD3-202ENST00000423635 A0A1W2PP18 115 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 CLOCKO15516 846 aa14.93□□□□□ -0.02
CHCHD3-202ENST00000423635 PLOD3O60568 738 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms