RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ZNF385CQ66K41 422 aaPredicted RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DHRS4L2Q6PKH6 230 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DEF8Q6ZN54 512 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FRRS1Q6ZNA5 592 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ZBTB49Q6ZSB9 765 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 LANCL3Q6ZV70 420 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 PIWIL3Q7Z3Z3 882 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 WDR53Q7Z5U6 358 aaPredicted RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 GLRX5Q86SX6 157 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 PIP4P1Q86T03 277 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 RANBP3LQ86VV4 465 aaPredicted RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 CARM1Q86X55 608 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 HIPK1Q86Z02 1210 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ZDHHC13Q8IUH4 622 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 TMEM151BQ8IW70 566 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 KBTBD2Q8IY47 623 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 CBR4Q8N4T8 237 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF614Q8N883 585 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 SMYD1Q8NB12 490 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 SLC16A11Q8NCK7 471 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 MORN4Q8NDC4 146 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DEFB124Q8NES8 71 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 OR5K1Q8NHB7 308 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 C16orf52Q8NHV5 167 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 WDR36Q8NI36 951 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 VANGL1Q8TAA9 524 aaPredicted RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FAM110BQ8TC76 370 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 OIT3Q8WWZ8 545 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 TMBIM1Q969X1 311 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 VMP1Q96GC9 406 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 C16orf58Q96GQ5 468 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF354BQ96LW1 612 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 PRRC1Q96M27 445 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 VSTM2LQ96N03 204 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 RDH12Q96NR8 316 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 SLC46A1Q96NT5 459 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 LPAR4Q99677 370 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 RBM4BQ9BQ04 359 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 G6PC3Q9BUM1 346 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 RBM4Q9BWF3 364 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ITPAQ9BY32 194 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 GABARAPL1Q9H0R8 117 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 OR10A5Q9H207 317 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 SLC38A1Q9H2H9 487 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 SOX17Q9H6I2 414 aaPredicted RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 EVA1AQ9H8M9 152 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ANKRA2Q9H9E1 313 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 IL1RAPQ9NPH3 570 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 NECTIN3Q9NQS3 549 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ENOPH1Q9UHY7 261 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF639Q9UID6 485 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 C3orf18Q9UK00 162 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 CNOT11Q9UKZ1 510 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ABCG2Q9UNQ0 655 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 IFT52Q9Y366 437 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ENPP4Q9Y6X5 453 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 KIAA1549Q9HCM3 1950 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DNAH14Q0VDD8 3507 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 HEATR5AQ86XA9 2040 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 EP300Q09472 2414 aaPredicted RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 VSTM2BA6NLU5 285 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 A8MUA0 341 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 H0YJX3 145 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 M0QX08 132 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 M0R3H8 397 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 AP3D1O14617 1153 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ACOX3O15254 700 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 DPM1O60762 260 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 STK17BO94768 372 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PRSS23O95084 383 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 MFN2O95140 757 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 DLGAP3O95886 979 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ONECUT2O95948 504 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 IGHEP01854 428 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 GUSBP08236 651 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 FTH1P19P0C7X4 201 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 CCL4P13236 92 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 NID1P14543 1247 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 UQCRBP14927 111 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 IL7RP16871 459 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 RHCEP18577 417 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ITIH1P19827 911 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 TNFRSF1BP20333 461 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 RPS4Y1P22090 263 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 IGFBP5P24593 272 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 RRM2P31350 389 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 GABRA3P34903 492 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 DCTP40126 519 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 KCNJ5P48544 419 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 TMED10P49755 219 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 EMDP50402 254 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ALDH3A2P51648 485 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 CRYBA2P53672 197 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 RAD23AP54725 363 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 EMP2P54851 167 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 CDH12P55289 794 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 NRG3P56975 720 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 SMIM11AP58511 58 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 CHRNEQ04844 493 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms