RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CPOQ8IVL8 374 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ETFBKMTQ8IXQ9 262 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 OR14C36Q8NHC7 312 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ADAMTS15Q8TE58 950 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 CDS1Q92903 461 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 OR51V1Q9H2C8 321 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 SLC38A1Q9H2H9 487 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 ADAP2Q9NPF8 381 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 KLHL1Q9NR64 748 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 PTGFRNQ9P2B2 879 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 MAFFQ9ULX9 164 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 GSTK1Q9Y2Q3 226 aa11.15□□□□□ -0.62
LIMK1-202ENST00000418310 CACNA1CQ13936 2221 aa11.15□□□□□ -0.63
LIMK1-202ENST00000418310 B4DXG7 233 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 HOXC11O43248 304 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ACP2P11117 423 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 DDX5P17844 614 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 DRD3P35462 400 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 SLC1A3P43003 542 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 DPTQ07507 201 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 TJAP1Q5JTD0 557 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 PLBD1Q6P4A8 553 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ZC3H14Q6PJT7 736 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 WFIKKN2Q8TEU8 576 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 OTUB2Q96DC9 234 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 MS4A6EQ96DS6 147 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 DPH1Q9BZG8 443 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 HDHD2Q9H0R4 259 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 TRIM45Q9H8W5 580 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 WASH6PQ9NQA3 447 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 GIMAP4Q9NUV9 329 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 H2AFY2Q9P0M6 372 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 TESQ9UGI8 421 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 APOBEC3BQ9UH17 382 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ZFR2Q9UPR6 939 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 MDC1Q14676 2089 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 CDC42EP2O14613 210 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 PLA2G10O15496 165 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 GYPBP06028 91 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 PRG2P13727 222 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 CPEP16870 476 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 CSNK2A2P19784 350 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 GCGRP47871 477 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 RAB28P51157 221 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 CDK5Q00535 292 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 FGL2Q14314 439 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 KLHL22Q53GT1 634 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 C1orf94Q6P1W5 598 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 MTFR2Q6P444 385 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 RAB42Q8N4Z0 105 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ASCC1Q8N9N2 400 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 CYB561A3Q8NBI2 242 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 TMIEQ8NEW7 156 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 OR10G6Q8NH81 332 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF707Q96C28 371 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 FRMD6Q96NE9 622 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 B3GAT2Q9NPZ5 323 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ATP13A2Q9NQ11 1180 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 SLC7A7Q9UM01 511 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 PCDHGB2Q9Y5G2 931 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 FAM240BA0A1B0GVZ2 78 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 POLR1CO15160 346 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 MAGEB4O15481 346 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ZIC2O95409 532 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ATP5A1P25705 553 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 AGERQ15109 404 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 PLK5Q496M5 336 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 DEFB134Q4QY38 66 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 C2orf27AQ580R0 203 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 PIGXQ8TBF5 258 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 FUZQ9BT04 418 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 IGFLR1Q9H665 355 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 MOV10Q9HCE1 1003 aaKnown RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ACSS1Q9NUB1 689 aaPredicted RBP11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ZSCAN32Q9NX65 697 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 ACAD8Q9UKU7 415 aa11.14□□□□□ -0.63
LIMK1-202ENST00000418310 PLOD3O60568 738 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 NFATC1O95644 943 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 IL1AP01583 271 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 TATDN3Q17R31 274 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 GLYR1Q49A26 553 aaPredicted RBP11.13□□□□□ -0.63
LIMK1-202ENST00000418310 Q5BKY6 102 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 ABHD17CQ6PCB6 329 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 ARL9Q6T311 187 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 MTSS1LQ765P7 747 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 COX14Q96I36 57 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 SPATA5L1Q9BVQ7 753 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 ENKD1Q9H0I2 346 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 TMEM74BQ9NUR3 256 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 CHST2Q9Y4C5 530 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 IQCMA0A1B0GVH7 501 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 GABRPO00591 440 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 S100A1P23297 94 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 PRR5P85299 388 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 TRAM2Q15035 370 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.63
LIMK1-202ENST00000418310 LCN1P1Q5VSP4 162 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 SIRT6Q8N6T7 355 aa11.13□□□□□ -0.63
LIMK1-202ENST00000418310 OR10H4Q8NGA5 316 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms