RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 PNPLA3Q9NST1 481 aa6.18□□□□□ -1.42
HDAC8-211ENST00000415409 VNN3Q9NY84 501 aa6.18□□□□□ -1.42
HDAC8-211ENST00000415409 DHCR7Q9UBM7 475 aaKnown RBP6.18□□□□□ -1.42
HDAC8-211ENST00000415409 RARRES3Q9UL19 164 aa6.18□□□□□ -1.42
HDAC8-211ENST00000415409 SATB2Q9UPW6 733 aa6.18□□□□□ -1.42
HDAC8-211ENST00000415409 IFT52Q9Y366 437 aa6.18□□□□□ -1.42
HDAC8-211ENST00000415409 MAGED1Q9Y5V3 778 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-211ENST00000415409 KCNE3Q9Y6H6 103 aa6.18□□□□□ -1.42
HDAC8-211ENST00000415409 SPAG17Q6Q759 2223 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 EIF4E1BA6NMX2 242 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 DLGAP1O14490 977 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 UGT2B11O75310 529 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 STX11O75558 287 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 JRKO75564 520 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CCNB2O95067 398 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 NKX2-2O95096 273 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 GADD45GO95257 159 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 OXSR1O95747 527 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CBX7O95931 251 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 LGI1O95970 557 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 DBIP07108 87 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 H1F0P07305 194 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CT62P0C5K7 136 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PABPC4LP0CB38 370 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 MAOAP21397 527 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CSTF2P33240 577 aaKnown RBP eCLIP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 GABRA3P34903 492 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PEX19P40855 299 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 YAP1P46937 504 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 RPS6KA3P51812 740 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PGDP52209 483 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 HMGA2P52926 109 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PDX1P52945 283 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 BTG2P78543 158 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 ADARB1P78563 741 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 IL1RL1Q01638 556 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 FUT5Q11128 374 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 IL18R1Q13478 541 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 TRA2AQ13595 282 aaKnown RBP eCLIP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PUM1Q14671 1186 aaKnown RBP eCLIP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 MICAQ29983 383 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 EXOC3L2Q2M3D2 409 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 MINDY4Q4G0A6 757 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CYP27C1Q4G0S4 372 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 LIN52Q52LA3 116 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 COLEC12Q5KU26 742 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 EXOSC6Q5RKV6 272 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PHF19Q5T6S3 580 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 C1orf189Q5VU69 101 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 RHBDD2Q6NTF9 364 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 FAHD1Q6P587 224 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 TTC33Q6PID6 262 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 DEF8Q6ZN54 512 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 ZNF574Q6ZN55 896 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PRR23CQ6ZRP0 262 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 QSOX2Q6ZRP7 698 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 WDR53Q7Z5U6 358 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 TSEN54Q7Z6J9 526 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 HS3ST5Q8IZT8 346 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 C8orf59Q8N0T1 100 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 ZNF619Q8N2I2 560 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 LINC00471Q8N535 108 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CHDHQ8NE62 594 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 OR10G2Q8NGC3 310 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 OR4C15Q8NGM1 316 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 OR52P1PQ8NH57 321 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 OR52J3Q8NH60 311 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 VANGL1Q8TAA9 524 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 DOK4Q8TEW6 326 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 APOBEC4Q8WW27 367 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 RMND5BQ96G75 393 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CNDP2Q96KP4 475 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 OR6C1Q96RD1 312 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 SDF2Q99470 211 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 LMF2Q9BU23 707 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CNPPD1Q9BV87 410 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 FNDC11Q9BVV2 318 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 YTHDF1Q9BYJ9 559 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 SLC38A1Q9H2H9 487 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 ZNF696Q9H7X3 374 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 FOLH1BQ9HBA9 442 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 NECTIN3Q9NQS3 549 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PNO1Q9NRX1 252 aaKnown RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 LANCL2Q9NS86 450 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 KRT84Q9NSB2 600 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 FAM118AQ9NWS6 357 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 UBAP1Q9NZ09 502 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 AKAP7Q9P0M2 348 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 PRODH2Q9UF12 536 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 ENOPH1Q9UHY7 261 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 CFL2Q9Y281 166 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 MYRFQ9Y2G1 1151 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 WDR45Q9Y484 360 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 TMEM184BQ9Y519 407 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 HEMK1Q9Y5R4 338 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-211ENST00000415409 LYVE1Q9Y5Y7 322 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 DSPPQ9NZW4 1301 aa6.17□□□□□ -1.42
HDAC8-211ENST00000415409 LOC100130705A0A1B0GUX0 176 aa6.16□□□□□ -1.42
HDAC8-211ENST00000415409 ARRDC5A6NEK1 342 aa6.16□□□□□ -1.42
HDAC8-211ENST00000415409 PRAMEF25A6NGN4 478 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms