RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 WIF1Q9Y5W5 379 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 CELSR2Q9HCU4 2923 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 NOTCH2Q04721 2471 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 A0A1W2PRB8 838 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 CFLARO15519 480 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 PSMG1O95456 288 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 SNRPB2P08579 225 aaKnown RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 CYP4B1P13584 511 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 EFNA1P20827 205 aaPredicted RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 EVI2BP34910 448 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 FRKP42685 505 aaPredicted RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 ZFP36L2P47974 494 aaKnown RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 EMX2Q04743 252 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 MPP2Q14168 576 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 PTGR1Q14914 329 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 MLC1Q15049 377 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 SMU1Q2TAY7 513 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 LSM12Q3MHD2 195 aaKnown RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 EIPR1Q53HC9 387 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 BEND6Q5SZJ8 279 aaPredicted RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 VASNQ6EMK4 673 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 YRDCQ86U90 279 aaKnown RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 CCDC71Q8IV32 467 aaPredicted RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 ULK2Q8IYT8 1036 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 WDSUB1Q8N9V3 476 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 FAM83FQ8NEG4 500 aaPredicted RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 OR7A2PQ8NGA2 310 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 OR4K17Q8NGC6 315 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 LILRB4Q8NHJ6 448 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 SLC9A6Q92581 669 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 ABTB1Q969K4 478 aaPredicted RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 CHMP6Q96FZ7 201 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 MS4A4EQ96PG1 132 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 TIMP4Q99727 224 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 ZNF395Q9H8N7 513 aaPredicted RBP10.22□□□□□ -0.77
RFFL-204ENST00000414419 KCNJ16Q9NPI9 418 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 NKIRAS1Q9NYS0 192 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 PPP4R1LQ9P1A2 415 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 DKKL1Q9UK85 242 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 SNX8Q9Y5X2 465 aa10.22□□□□□ -0.77
RFFL-204ENST00000414419 TMEM120BA0PK00 339 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 FAM90A27PA6NNH2 459 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 SCO2O43819 266 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 IL33O95760 270 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 ACTL6AO96019 429 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 ALOX5P09917 674 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 GLI4P10075 376 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 LAMP1P11279 417 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 G6PDP11413 515 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 BMP7P18075 431 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 SRD5A2P31213 254 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 PRIM2P49643 509 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 MAGOHP61326 146 aaKnown RBP10.21□□□□□ -0.77
RFFL-204ENST00000414419 CRYZQ08257 329 aaKnown RBP10.21□□□□□ -0.77
RFFL-204ENST00000414419 BST1Q10588 318 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 CDSNQ15517 529 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 PGS1Q32NB8 556 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 SPDYE7PQ495Y7 208 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 NHSL2Q5HYW2 709 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 CES4AQ5XG92 561 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 ATG16L1Q676U5 607 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 RTL6Q6ICC9 239 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 OR5M10Q6IEU7 315 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 ZCCHC12Q6PEW1 402 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 ENPP6Q6UWR7 440 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 IFNEQ86WN2 208 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 TRIM42Q8IWZ5 723 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 MGARPQ8TDB4 240 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 JADE3Q92613 823 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 NTNG2Q96CW9 530 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 RMND5BQ96G75 393 aaPredicted RBP10.21□□□□□ -0.77
RFFL-204ENST00000414419 UGT2B28Q9BY64 529 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 TBL1XR1Q9BZK7 514 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 C20orf27Q9GZN8 174 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 AKTIPQ9H8T0 292 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 ZCCHC3Q9NUD5 404 aaKnown RBP10.21□□□□□ -0.77
RFFL-204ENST00000414419 TAS2R10Q9NYW0 307 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 ABCG2Q9UNQ0 655 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 FAM215AQ9Y5M1 114 aa10.21□□□□□ -0.77
RFFL-204ENST00000414419 DOCK7Q96N67 2140 aa10.21□□□□□ -0.78
RFFL-204ENST00000414419 ITPR2Q14571 2701 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 GXYLT2A0PJZ3 443 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 HSPB2A8KAH6 182 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 NKX2-2O95096 273 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 EPPINO95925 133 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 IL2RAP01589 272 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 HPGDP15428 266 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 DPP4P27487 766 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 CCT3P49368 545 aaKnown RBP10.2□□□□□ -0.78
RFFL-204ENST00000414419 CLDN8P56748 225 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 STX5Q13190 355 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 RCAN2Q14206 197 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 HSPB2Q16082 182 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 RIPPLY2Q5TAB7 128 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 AAGABQ6PD74 315 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 MCEMP1Q8IX19 187 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 KRTCAP2Q8N6L1 136 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 COX18Q8N8Q8 333 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 FBXO30Q8TB52 745 aa10.2□□□□□ -0.78
RFFL-204ENST00000414419 OR5P2Q8WZ92 322 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms