RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 CD27P26842 260 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 NKX3-2P78367 333 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF45Q02386 682 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 HNRNPA0Q13151 305 aaKnown RBP16.3■□□□□ 0.2
PHRF1-202ENST00000413872 DCAF12Q5T6F0 453 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 LHFPL3Q86UP9 236 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 UBTD2Q8WUN7 234 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 FCAMRQ8WWV6 532 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 SORT1Q99523 831 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 ENY2Q9NPA8 101 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 ABCD2Q9UBJ2 740 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 A6NLC8 198 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 GSTT2P0CG29 244 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF35P13682 527 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 CDKN2CP42773 168 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 HLCSP50747 726 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 RAB38P57729 211 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 BCL7AQ4VC05 210 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 C6orf132Q5T0Z8 1188 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 METTL4Q8N3J2 472 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 OR8K3Q8NH51 312 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 THAP6Q8TBB0 222 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 NETO1Q8TDF5 533 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 PISDQ9UG56 409 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 ST14Q9Y5Y6 855 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 GTDC1Q4AE62 458 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 LIPKQ5VXJ0 399 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 OR4K13Q8NH42 304 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF300Q96RE9 604 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-202ENST00000413872 SLC6A16Q9GZN6 736 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 CDH20Q9HBT6 801 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 EURLQ9NYK6 297 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 ACAD8Q9UKU7 415 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 TCRBV5S1A1TA0A578 114 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 GABRR3A8MPY1 467 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 CSNK1EP49674 416 aaKnown RBP16.3■□□□□ 0.2
PHRF1-202ENST00000413872 PUDPQ08623 228 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 PAGE3Q5JUK9 113 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 NAXEQ8NCW5 288 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 OR5T2Q8NGG2 359 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 RABL2AQ9UBK7 228 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-202ENST00000413872 RABL2BQ9UNT1 228 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 GPR45Q9Y5Y3 372 aa16.3■□□□□ 0.2
PHRF1-202ENST00000413872 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-202ENST00000413872 KANTRA0A1W2PQU2 76 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 H0YGG7 62 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 PVRP15151 417 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 MAOBP27338 520 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 ARF3P61204 181 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-202ENST00000413872 STX12Q86Y82 276 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 OR52R1Q8NGF1 315 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 UBXN10Q96LJ8 280 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 FRMD6Q96NE9 622 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 CHIAQ9BZP6 476 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 IRS1P35568 1242 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 VASPP50552 380 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-202ENST00000413872 KIAA1024LP59773 190 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 E2F1Q01094 437 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 TIGD4Q8IY51 512 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 GRPEL2Q8TAA5 225 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 SPTSSAQ969W0 71 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 VNN3Q9NY84 501 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 LRP5O75197 1615 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 MEGF11A6BM72 1044 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 OR2AT4A6NND4 320 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 UGT2B7P16662 529 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF615Q8N8J6 731 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 PNPLA1Q8N8W4 532 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 TMEM239Q8WW34 195 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 PRRC1Q96M27 445 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 MNTQ99583 582 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 UBQLN4Q9NRR5 601 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 FAM53CQ9NYF3 392 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 CBLCQ9ULV8 474 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 GGT3PA6NGU5 568 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 RBBP9O75884 186 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 RGS9O75916 674 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-202ENST00000413872 SCGNO76038 276 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 SMAD4Q13485 552 aaKnown RBP16.29■□□□□ 0.2
PHRF1-202ENST00000413872 PLEKHN1Q494U1 663 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-202ENST00000413872 OGFRL1Q5TC84 451 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF613Q6PF04 617 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 SYNPOQ8N3V7 929 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 SAMD12Q8N8I0 201 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 TMEM168Q9H0V1 697 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 CLMPQ9H6B4 373 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 TMA7Q9Y2S6 64 aaKnown RBP16.29■□□□□ 0.2
PHRF1-202ENST00000413872 KCNIP3Q9Y2W7 256 aa16.29■□□□□ 0.2
PHRF1-202ENST00000413872 H3BSH0 61 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 GALR3O60755 368 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 CKMT1AP12532 417 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 PRDX3P30048 256 aaKnown RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 MRPL58Q14197 206 aaKnown RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 BCL2L15Q5TBC7 163 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 DTWD1Q8N5C7 304 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 OR13C3Q8NGS6 347 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 CXCL16Q9H2A7 254 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 C1GALT1Q9NS00 363 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 STARD5Q9NSY2 213 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF69Q9UC07 566 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms