RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 RBMXL3Q8N7X1 1067 aaKnown RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 FAM47BQ8NA70 645 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 CPT1CQ8TCG5 803 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 STT3BQ8TCJ2 826 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 MCOLN3Q8TDD5 553 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 EEF1AKMT1Q8WVE0 214 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 LRTOMTQ8WZ04 291 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 HDAC2Q92769 488 aaKnown RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ATP6V1E2Q96A05 226 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 NACC2Q96BF6 587 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 RCN3Q96D15 328 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 AURKBQ96GD4 344 aaPredicted RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SH3YL1Q96HL8 342 aaPredicted RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 TXNDC15Q96J42 360 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 GPR78Q96P69 363 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SMAD5Q99717 465 aaKnown RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 CRB3Q9BUF7 120 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ADI1Q9BV57 179 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 CD244Q9BZW8 370 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 OR10A5Q9H207 317 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SLC26A1Q9H2B4 701 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 NOL11Q9H8H0 719 aaKnown RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ZNF304Q9HCX3 659 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 SLAMF7Q9NQ25 335 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 AKIP1Q9NQ31 210 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 NECTIN3Q9NQS3 549 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 TAS2R13Q9NYV9 303 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 LUZP4Q9P127 313 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 STOX2Q9P2F5 926 aaPredicted RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 CTSFQ9UBX1 484 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 CDC14AQ9UNH5 594 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 RUVBL1Q9Y265 456 aaKnown RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 NDUFAF1Q9Y375 327 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 HS3ST3B1Q9Y662 390 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 COPG1Q9Y678 874 aaKnown RBP4.95□□□□□ -1.62
LINC00342-201ENST00000412393 ATP23Q9Y6H3 246 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 HIVEP3Q5T1R4 2406 aa4.95□□□□□ -1.62
LINC00342-201ENST00000412393 hCG_2014768A0A024R1R8 64 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 IGLV3-12A0A075B6K2 115 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 A0A096LPK6 155 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 IGKV1-8A0A0C4DH67 115 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 A0A1W2PPW3 197 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 VSTM2BA6NLU5 285 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 FAM90A27PA6NNH2 459 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PLOD2O00469 737 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SOCS2O14508 198 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SDHDO14521 159 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SOCS6O14544 535 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 HAT1O14929 419 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SLC16A5O15375 505 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 CLOCKO15516 846 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 IDH3BO43837 385 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ALOX12BO75342 701 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 VPS4BO75351 444 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 JRKO75564 520 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 IPO13O94829 963 aaKnown RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 STAMBPO95630 424 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 OXSR1O95747 527 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ABHD16AO95870 558 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 AHSGP02765 367 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ALPPP05187 535 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 C8GP07360 202 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 HIST1H2AGP0C0S8 130 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 IL1RNP18510 177 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 HIST1H2ADP20671 130 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ITGA3P26006 1051 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 CDKN2DP55273 166 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 CXCR4P61073 352 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TBPL1P62380 186 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PHC1P78364 1004 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TIAL1Q01085 375 aaKnown RBP eCLIP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 AIMP2Q13155 320 aaKnown RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SP140Q13342 867 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 NAE1Q13564 534 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 KRR1Q13601 381 aaKnown RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 INPP5JQ15735 1006 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 KCNJ8Q15842 424 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 HKDC1Q2TB90 917 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 TRIM16LQ309B1 348 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 VWA2Q5GFL6 755 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 GARNL3Q5VVW2 1013 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 XAF1Q6GPH4 301 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 JMJD6Q6NYC1 403 aaPredicted RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 SLC2A7Q6PXP3 512 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 AGTRAPQ6RW13 159 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 KIRREL2Q6UWL6 708 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 KIAA0408Q6ZU52 694 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 IGFN1Q86VF2 1251 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ZC3HC1Q86WB0 502 aaKnown RBP4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PLD3Q8IV08 490 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PRSS58Q8IYP2 241 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 CADM3Q8N126 398 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 MYO1HQ8N1T3 1032 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 PARP8Q8N3A8 854 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 ZADH2Q8N4Q0 377 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 AFAP1L2Q8N4X5 818 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 DHRSXQ8N5I4 330 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 CSNK1A1LQ8N752 337 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 Q8NA96 180 aa4.94□□□□□ -1.62
LINC00342-201ENST00000412393 HIPK4Q8NE63 616 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms