RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 CAPN3P20807 821 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 EVI2BP34910 448 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 PNLIPRP2P54317 469 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 MANFP55145 182 aaKnown RBP10.53□□□□□ -0.72
LINC00963-201ENST00000412141 FOXF2Q12947 444 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 KIAA0040Q15053 153 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 SF3B4Q15427 424 aaKnown RBP eCLIP10.53□□□□□ -0.728e-7■■■■□ 23.2
LINC00963-201ENST00000412141 ZNHIT3Q15649 155 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-201ENST00000412141 DECR1Q16698 335 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 RFTN2Q52LD8 501 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-201ENST00000412141 NHSL2Q5HYW2 709 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 TMEM81Q6P7N7 255 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 ENPP6Q6UWR7 440 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 UBQLNLQ8IYU4 475 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 GCNT2Q8N0V5 402 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 TCP10LQ8TDR4 215 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 GPR151Q8TDV0 419 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 NUDT8Q8WV74 236 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 PIK3R3Q92569 461 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 SLC9A6Q92581 669 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 INTS12Q96CB8 462 aaKnown RBP10.53□□□□□ -0.72
LINC00963-201ENST00000412141 PPCDCQ96CD2 204 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 OTUB1Q96FW1 271 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-201ENST00000412141 YIPF4Q9BSR8 244 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 OR2B2Q9GZK3 357 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 Q9N2J8 555 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 TAS2R7Q9NYW3 318 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 CRIM1Q9NZV1 1036 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 PPP4R1LQ9P1A2 415 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 KCNN3Q9UGI6 736 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 DNAJC15Q9Y5T4 150 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 ARHGAP21Q5T5U3 1957 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 ABCA4P78363 2273 aa10.53□□□□□ -0.72
LINC00963-201ENST00000412141 WDR91A4D1P6 747 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 CD8B2A6NJW9 211 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 CLCA1A8K7I4 914 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 SYT5O00445 386 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 PLOD2O00469 737 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 ZIC3O60481 467 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 PEX11AO75192 247 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 SKAP2O75563 359 aaPredicted RBP10.52□□□□□ -0.73
LINC00963-201ENST00000412141 TMIGD3P0DMS9 266 aaPredicted RBP10.52□□□□□ -0.73
LINC00963-201ENST00000412141 BCKDHAP12694 445 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 CTSSP25774 331 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 SRD5A2P31213 254 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 TIMP3P35625 211 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 ASCL1P50553 236 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 GAS1P54826 345 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 MRPS22P82650 360 aaKnown RBP10.52□□□□□ -0.73
LINC00963-201ENST00000412141 CYP27C1Q4G0S4 372 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 KANK2Q63ZY3 851 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 POMZP3Q6PJE2 187 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 IKBIPQ70UQ0 350 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 LUZP2Q86TE4 346 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 OR2L13Q8N349 312 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 DUSP19Q8WTR2 217 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 TWIST2Q8WVJ9 160 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00963-201ENST00000412141 CHMP6Q96FZ7 201 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 RMND5BQ96G75 393 aaPredicted RBP10.52□□□□□ -0.73
LINC00963-201ENST00000412141 GPATCH1Q9BRR8 931 aaKnown RBP10.52□□□□□ -0.73
LINC00963-201ENST00000412141 TRMOQ9BU70 441 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 C1orf50Q9BV19 199 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 RTN4RQ9BZR6 473 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 REEP4Q9H6H4 257 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 DNAJB12Q9NXW2 375 aaKnown RBP10.52□□□□□ -0.73
LINC00963-201ENST00000412141 ITPR3Q14573 2671 aa10.52□□□□□ -0.73
LINC00963-201ENST00000412141 ZFHX3Q15911 3703 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 MBD3L4A6NDZ8 208 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-201ENST00000412141 MBD3L3A6NE82 208 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-201ENST00000412141 MBD3L5A6NJ08 208 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-201ENST00000412141 SHISA8B8ZZ34 492 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 H0YC42 278 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 LSM1O15116 133 aaKnown RBP10.51□□□□□ -0.73
LINC00963-201ENST00000412141 FADS1O60427 444 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 UTS2O95399 124 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 IGKV1D-16P01601 117 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 NUDT17P0C025 328 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 PRPS2P11908 318 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 NEFHP12036 1026 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 CPN1P15169 458 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 HK1P19367 917 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 LHX2P50458 406 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 TPD52P55327 224 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-201ENST00000412141 GFRA1P56159 465 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 UGT3A2Q3SY77 523 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 RAET1LQ5VY80 246 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 AAGABQ6PD74 315 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 FIGNL1Q6PIW4 674 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 GRAMD2AQ8IUY3 354 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 RIBC1Q8N443 379 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-201ENST00000412141 GATSQ8NAP1 163 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 NUP43Q8NFH3 380 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 MBD3L2Q8NHZ7 208 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-201ENST00000412141 PPP1R14CQ8TAE6 165 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 LINC01560Q8TB33 94 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 ZPLD1Q8TCW7 415 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 AENQ8WTP8 325 aaKnown RBP10.51□□□□□ -0.73
LINC00963-201ENST00000412141 SMPDL3BQ92485 455 aa10.51□□□□□ -0.73
LINC00963-201ENST00000412141 JADE3Q92613 823 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms