RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 CCDC124Q96CT7 223 aaKnown RBP18.68■□□□□ 0.58
PTPA-208ENST00000411917 PRDM4Q9UKN5 801 aa18.68■□□□□ 0.58
PTPA-208ENST00000411917 PACSIN3Q9UKS6 424 aa18.68■□□□□ 0.58
PTPA-208ENST00000411917 YARS2Q9Y2Z4 477 aaKnown RBP18.68■□□□□ 0.58
PTPA-208ENST00000411917 OR6C70A6NIJ9 312 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 PRKNO60260 465 aaPredicted RBP18.67■□□□□ 0.58
PTPA-208ENST00000411917 GCM2O75603 506 aaPredicted RBP18.67■□□□□ 0.58
PTPA-208ENST00000411917 H6PDO95479 791 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 NADKO95544 446 aaPredicted RBP18.67■□□□□ 0.58
PTPA-208ENST00000411917 EFR3AQ14156 821 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 C1orf146Q5VVC0 180 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 IRAK1BP1Q5VVH5 260 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 TYW3Q6IPR3 259 aaKnown RBP18.67■□□□□ 0.58
PTPA-208ENST00000411917 TMEM81Q6P7N7 255 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 GPALPP1Q8IXQ4 340 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 ZNF619Q8N2I2 560 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 BCORP1Q8N888 145 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 FAM156AQ8NDB6 213 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 PIK3R3Q92569 461 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 DUS3LQ96G46 650 aaKnown RBP18.67■□□□□ 0.58
PTPA-208ENST00000411917 NSMCE2Q96MF7 247 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 GAL3ST4Q96RP7 486 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 LHPPQ9H008 270 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 PCDHAC1Q9H158 963 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 DCAF13Q9NV06 445 aaKnown RBP18.67■□□□□ 0.58
PTPA-208ENST00000411917 GMPR2Q9P2T1 348 aaKnown RBP18.67■□□□□ 0.58
PTPA-208ENST00000411917 RPS6KA6Q9UK32 745 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 USP22Q9UPT9 525 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 SAMD4AQ9UPU9 718 aaKnown RBP18.67■□□□□ 0.58
PTPA-208ENST00000411917 IFT52Q9Y366 437 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 WDR45Q9Y484 360 aa18.67■□□□□ 0.58
PTPA-208ENST00000411917 GXYLT2A0PJZ3 443 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 CDC14CA4D256 554 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 NPIPB9F8W1W9 429 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 RRP8O43159 456 aaKnown RBP18.66■□□□□ 0.58
PTPA-208ENST00000411917 KLK10O43240 276 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 TSPAN2O60636 221 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 C8BP07358 591 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 THBS1P07996 1170 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 FBXO45P0C2W1 286 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 UMPSP11172 480 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 ATP6V1C1P21283 382 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 ABCD3P28288 659 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 NR0B1P51843 470 aaKnown RBP18.66■□□□□ 0.58
PTPA-208ENST00000411917 UCNP55089 124 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 MLF1P58340 268 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 ZNF141Q15928 474 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 GPAT3Q53EU6 434 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 WDR53Q7Z5U6 358 aaPredicted RBP18.66■□□□□ 0.58
PTPA-208ENST00000411917 APLFQ8IW19 511 aaPredicted RBP18.66■□□□□ 0.58
PTPA-208ENST00000411917 FBXO30Q8TB52 745 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 RNF138Q8WVD3 245 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 FIG4Q92562 907 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 TTC9Q92623 222 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 SLC35B4Q969S0 331 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 RMND5BQ96G75 393 aaPredicted RBP18.66■□□□□ 0.58
PTPA-208ENST00000411917 SECISBP2Q96T21 854 aaKnown RBP18.66■□□□□ 0.58
PTPA-208ENST00000411917 PIF1Q9H611 641 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 RUBCNLQ9H714 662 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 TRIM45Q9H8W5 580 aaPredicted RBP18.66■□□□□ 0.58
PTPA-208ENST00000411917 HHATLQ9HCP6 504 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 EGFL7Q9UHF1 273 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 TEKT2Q9UIF3 430 aa18.66■□□□□ 0.58
PTPA-208ENST00000411917 AKAP13Q12802 2813 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 PCSK5Q92824 1860 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 TCRBV3S1A0A5B6 114 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 TMEM8BA6NDV4 472 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 AGAP5A6NIR3 686 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 NME6O75414 186 aaPredicted RBP18.65■□□□□ 0.58
PTPA-208ENST00000411917 PPM1BO75688 479 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 SORBS2O94875 1100 aaKnown RBP18.65■□□□□ 0.58
PTPA-208ENST00000411917 ZIC2O95409 532 aaPredicted RBP18.65■□□□□ 0.58
PTPA-208ENST00000411917 ITGAMP11215 1152 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 WT1P19544 449 aaPredicted RBP18.65■□□□□ 0.58
PTPA-208ENST00000411917 ENDOUP21128 410 aaKnown RBP18.65■□□□□ 0.58
PTPA-208ENST00000411917 SOX11P35716 441 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 KRT20P35900 424 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 PLCXD2Q0VAA5 305 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 TCTN3Q6NUS6 607 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 OPN5Q6U736 354 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 CBLL1Q75N03 491 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 EIF3MQ7L2H7 374 aaKnown RBP18.65■□□□□ 0.58
PTPA-208ENST00000411917 RPS19BP1Q86WX3 136 aaKnown RBP18.65■□□□□ 0.58
PTPA-208ENST00000411917 CMIPQ8IY22 773 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 OR4N2Q8NGD1 307 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 PSMF1Q92530 271 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 ZNF354BQ96LW1 612 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 LRGUKQ96M69 825 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 NPFFR2Q9Y5X5 522 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 FREM2Q5SZK8 3169 aa18.65■□□□□ 0.58
PTPA-208ENST00000411917 TCRBV5S2A0A599 114 aa18.64■□□□□ 0.57
PTPA-208ENST00000411917 SYT5O00445 386 aa18.64■□□□□ 0.57
PTPA-208ENST00000411917 NKX2-8O15522 239 aa18.64■□□□□ 0.57
PTPA-208ENST00000411917 EFSO43281 561 aa18.64■□□□□ 0.57
PTPA-208ENST00000411917 MFN2O95140 757 aa18.64■□□□□ 0.57
PTPA-208ENST00000411917 GPIP06744 558 aa18.64■□□□□ 0.57
PTPA-208ENST00000411917 DBIP07108 87 aaKnown RBP18.64■□□□□ 0.57
PTPA-208ENST00000411917 ATP6V1B2P21281 511 aa18.64■□□□□ 0.57
PTPA-208ENST00000411917 PRKAR1BP31321 381 aa18.64■□□□□ 0.57
PTPA-208ENST00000411917 ADH7P40394 386 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms