RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 GNLYP22749 145 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 DNASE1P24855 282 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 CA5AP35218 305 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 SOAT1P35610 550 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 CACNG1Q06432 222 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 MZT1Q08AG7 82 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 CDH17Q12864 832 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 RCN2Q14257 317 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 GPR18Q14330 331 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 ITIH4Q14624 930 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 POU6F1Q14863 301 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 SIX1Q15475 284 aaPredicted RBP5.71□□□□□ -1.5
LSM5-203ENST00000409782 KBTBD12Q3ZCT8 623 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 FNBP1LQ5T0N5 605 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 TMEM220Q6QAJ8 160 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 AFTPHQ6ULP2 937 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 C4orf22Q6V702 233 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 PACS1Q6VY07 963 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 NLRP9Q7RTR0 991 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 PRSS42Q7Z5A4 293 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 ARHGAP22Q7Z5H3 698 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 SIAH3Q8IW03 269 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 GCSAMQ8N6F7 178 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 BMPERQ8N8U9 685 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 OR2L2Q8NH16 312 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 WDR20Q8TBZ3 569 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 C1orf54Q8WWF1 131 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.71□□□□□ -1.52e-6■■■■■ 59.4
LSM5-203ENST00000409782 SLAMF9Q96A28 289 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 NXNL1Q96CM4 212 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 NAF1Q96HR8 494 aaKnown RBP5.71□□□□□ -1.5
LSM5-203ENST00000409782 RANBP9Q96S59 729 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 GFI1Q99684 422 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 ZPBPQ9BS86 351 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 HAUS8Q9BT25 410 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 TBC1D10AQ9BXI6 508 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 RAB33BQ9H082 229 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 KLK15Q9H2R5 256 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 MAP6D1Q9H9H5 199 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 SLC40A1Q9NP59 571 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 HOMER3Q9NSC5 361 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 IMP3Q9NV31 184 aaKnown RBP5.71□□□□□ -1.5
LSM5-203ENST00000409782 NLE1Q9NVX2 485 aaPredicted RBP5.71□□□□□ -1.5
LSM5-203ENST00000409782 ASB6Q9NWX5 421 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 TMEM9Q9P0T7 183 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 ZNF624Q9P2J8 865 aaPredicted RBP5.71□□□□□ -1.5
LSM5-203ENST00000409782 HEY2Q9UBP5 337 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 PPP2R2CQ9Y2T4 447 aa5.71□□□□□ -1.5
LSM5-203ENST00000409782 BPTFQ12830 3046 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 A0A1W2PPQ1 181 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 A0A1W2PRV1 198 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 LINC01548A6NM66 108 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 EFCAB7A8K855 629 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 SPINT2O43291 252 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 AP2A2O94973 939 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 FGGP02679 453 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 FTH1P02794 183 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 APRTP07741 180 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 FGF3P11487 239 aaPredicted RBP5.7□□□□□ -1.5
LSM5-203ENST00000409782 ATP1B2P14415 290 aaPredicted RBP5.7□□□□□ -1.5
LSM5-203ENST00000409782 AMD1P17707 334 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 MSNP26038 577 aaKnown RBP5.7□□□□□ -1.5
LSM5-203ENST00000409782 NMBRP28336 390 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 PBLDP30039 288 aaPredicted RBP5.7□□□□□ -1.5
LSM5-203ENST00000409782 HNRNPH1P31943 449 aaKnown RBP5.7□□□□□ -1.5
LSM5-203ENST00000409782 APOBEC1P41238 236 aaKnown RBP5.7□□□□□ -1.5
LSM5-203ENST00000409782 GFERP55789 205 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 ACVR1Q04771 509 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 MEP1AQ16819 746 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 FAM174BQ3ZCQ3 159 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 DCAF12Q5T6F0 453 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 LYPLAL1Q5VWZ2 237 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 PRR27Q6MZM9 219 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 CYB5D1Q6P9G0 228 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 ZNF534Q76KX8 674 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 SERPINA9Q86WD7 417 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 BEST3Q8N1M1 668 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 RASGEF1CQ8N431 466 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 DNAAF3Q8N9W5 541 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 SEMA6DQ8NFY4 1073 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 OR52K1Q8NGK4 314 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 OR13J1Q8NGT2 312 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 ART4Q93070 314 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 WBP1Q96G27 269 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 CDKN2AIPNLQ96HQ2 116 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 C9orf72Q96LT7 481 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 C12orf66Q96MD2 445 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 CCNL2Q96S94 520 aaPredicted RBP5.7□□□□□ -1.5
LSM5-203ENST00000409782 CCM2Q9BSQ5 444 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 WWP1Q9H0M0 922 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 AAMDCQ9H7C9 122 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 KIR3DX1Q9H7L2 352 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 SLC39A1Q9NY26 324 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 EPHA6Q9UF33 1036 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 IL19Q9UHD0 177 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 RALYQ9UKM9 306 aaKnown RBP5.7□□□□□ -1.5
LSM5-203ENST00000409782 WDR37Q9Y2I8 494 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 HEBP2Q9Y5Z4 205 aa5.7□□□□□ -1.5
LSM5-203ENST00000409782 CFAP46Q8IYW2 2715 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms