RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OR2T3Q8NH03 318 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 DTX3LQ8TDB6 740 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 PDCD6IPQ8WUM4 868 aaKnown RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 UBLCP1Q8WVY7 318 aaPredicted RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 OR8D1Q8WZ84 308 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 SLC22A18Q96BI1 424 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 RMDN1Q96DB5 314 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 SLC47A1Q96FL8 570 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 CERS2Q96G23 380 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ZIM3Q96PE6 472 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 OR6C1Q96RD1 312 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 NAT9Q9BTE0 207 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 TRABDQ9H4I3 376 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ATP13A3Q9H7F0 1226 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ZNF696Q9H7X3 374 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 CHRAC1Q9NRG0 131 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 NLE1Q9NVX2 485 aaPredicted RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 HACD3Q9P035 362 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 IL17CQ9P0M4 197 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 FETUBQ9UGM5 382 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 SLC2A6Q9UGQ3 507 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 MMP17Q9ULZ9 603 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 TMEM5Q9Y2B1 443 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 MTF2Q9Y483 593 aaPredicted RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 ARL5AQ9Y689 179 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 MAD1L1Q9Y6D9 718 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 RPS6KL1Q9Y6S9 549 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 FAM169AQ9Y6X4 670 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 SPAG17Q6Q759 2223 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ZDBF2Q9HCK1 2354 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ANKRD12Q6UB98 2062 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 ABCA7Q8IZY2 2146 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 GON4LQ3T8J9 2241 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 LRP4O75096 1905 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 TP53BP1Q12888 1972 aaPredicted RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 A0A0U1RQS6 177 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 A0A1B0GU03 582 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 PRSS51A0A1B0GVH4 220 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 GLOD5A6NK44 160 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 PSMD11O00231 422 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 SLC22A2O15244 555 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 SLC7A4O43246 635 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 PGM3O95394 542 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 PIRTP0C851 137 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 ADRB3P13945 408 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 ZNF30P17039 623 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 CKMT2P17540 419 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 SAT1P21673 171 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 FOXN2P32314 431 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 PHBP35232 272 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 MMP12P39900 470 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 TNNT3P45378 269 aaPredicted RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 CSRP3P50461 194 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 NR0B1P51843 470 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 STC1P52823 247 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 DCDC1P59894 354 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 RPS14P62263 151 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 POLR2LP62875 67 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 XIAPP98170 497 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 CDK3Q00526 305 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 NAB1Q13506 487 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 PEX6Q13608 980 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 KRT33BQ14525 404 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 PTPRCAPQ14761 206 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 EFTUD2Q15029 972 aaKnown RBP eCLIP3.86□□□□□ -1.794e-8■■■■□ 23.4
CLK1-203ENST00000409769 CST6Q15828 149 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 KLHL38Q2WGJ6 581 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 TMEM52BQ4KMG9 183 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 LRRC73Q5JTD7 316 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 EOGTQ5NDL2 527 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 CFAP58Q5T655 872 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 FAM46CQ5VWP2 391 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 LRRC66Q68CR7 880 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 ZNF776Q68DI1 518 aaPredicted RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 PDPK2PQ6A1A2 396 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 CASC4Q6P4E1 433 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 CES3Q6UWW8 571 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 Q6ZS52 159 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 ERN2Q76MJ5 926 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 TRMT11Q7Z4G4 463 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 GLT6D1Q7Z4J2 308 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 MMAAQ8IVH4 418 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 UBALD2Q8IYN6 164 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 TAGAPQ8N103 731 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 NDUFAF2Q8N183 169 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 MINDY1Q8N5J2 469 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 OR13C4Q8NGS5 318 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 RPLP0P6Q8NHW5 317 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 BLOC1S5Q8TDH9 187 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 DCAKDQ8WVC6 231 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 DAZLQ92904 295 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 RAB7BQ96AH8 199 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 CLDN23Q96B33 292 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 MTERF3Q96E29 417 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 CFAP36Q96G28 342 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 CDKN2AIPNLQ96HQ2 116 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 PPP1R16AQ96I34 528 aa3.86□□□□□ -1.79
CLK1-203ENST00000409769 DNAJC1Q96KC8 554 aaKnown RBP3.86□□□□□ -1.79
CLK1-203ENST00000409769 CYTH2Q99418 400 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms