RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ZNF770Q6IQ21 691 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-206ENST00000409754 SATL1Q86VE3 508 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 VRK2Q86Y07 508 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 PEX5LQ8IYB4 626 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 GPR135Q8IZ08 494 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 METTL27Q8N6F8 245 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-206ENST00000409754 COX18Q8N8Q8 333 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 OR9Q2Q8NGE9 314 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 OR52R1Q8NGF1 315 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 ADAMTS16Q8TE57 1224 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 RHBDD1Q8TEB9 315 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 PMM1Q92871 262 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 RIT1Q92963 219 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 FKBP10Q96AY3 582 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 ZG16BQ96DA0 208 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 PRRC1Q96M27 445 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF578Q96N58 590 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-206ENST00000409754 NUDT22Q9BRQ3 303 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 PELOQ9BRX2 385 aaKnown RBP13.11□□□□□ -0.31
LIMS2-206ENST00000409754 SAP130Q9H0E3 1048 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 RLIMQ9NVW2 624 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 ENOPH1Q9UHY7 261 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 CDC14AQ9UNH5 594 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 FREM2Q5SZK8 3169 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 A0A1W2PRQ8 180 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 STX11O75558 287 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 CDC123O75794 336 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 UGT2B17O75795 530 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 DKK1O94907 266 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 NKX2-2O95096 273 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 FUT4P22083 530 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ALDH3B2P48448 385 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 RPP38P78345 283 aaKnown RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 BTG2P78543 158 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF155Q12901 538 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 DUSP8Q13202 625 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 DGCR6Q14129 220 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ERV3-1Q14264 604 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 MEP1AQ16819 746 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 CTU2Q2VPK5 515 aaKnown RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 DCST1Q5T197 706 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 AP1ARQ63HQ0 302 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 GUSBP11Q6P575 273 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 TTLL10Q6ZVT0 673 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 HMGN2P46Q86SG4 172 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 GLRX5Q86SX6 157 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 PARP8Q8N3A8 854 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 HRASLS5Q96KN8 279 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 OR1F2PQ96R84 312 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 FUZQ9BT04 418 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 LMF2Q9BU23 707 aaKnown RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 FANCEQ9HB96 536 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 POLE3Q9NRF9 147 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 KLHL28Q9NXS3 571 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 SERTAD3Q9UJW9 196 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 MKLN1Q9UL63 735 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF232Q9UNY5 417 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF443Q9Y2A4 671 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 MMACHCQ9Y4U1 282 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 SPTBP11277 2137 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 PTPRBP23467 1997 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 CEP295Q9C0D2 2601 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 TRBV4-1A0A0J9YWV2 114 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 CPED1A4D0V7 1026 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 AGAP5A6NIR3 686 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 A8MU76 341 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 THBS1P07996 1170 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 GUSBP08236 651 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ANKRD34CP0C6C1 535 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 IL7RP16871 459 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 RPS4Y1P22090 263 aaKnown RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 CRHBPP24387 322 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 GABRA3P34903 492 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 NUP107P57740 925 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 POU6F2P78424 691 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 IL5RAQ01344 420 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 PIN1Q13526 163 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 LARS2Q15031 903 aaKnown RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 NPTX1Q15818 432 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 NADK2Q4G0N4 442 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 FGD3Q5JSP0 725 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 PERM1Q5SV97 790 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 SLCO6A1Q86UG4 719 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF619Q8N2I2 560 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 AQP11Q8NBQ7 271 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 GPR151Q8TDV0 419 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 NAT6Q93015 286 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF566Q969W8 418 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF501Q96CX3 271 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 CNDP2Q96KP4 475 aaKnown RBP13.1□□□□□ -0.31
LIMS2-206ENST00000409754 NDC1Q9BTX1 674 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 FOLH1BQ9HBA9 442 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 LANCL2Q9NS86 450 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 BLOC1S6Q9UL45 172 aa13.1□□□□□ -0.31
LIMS2-206ENST00000409754 MGAT4BQ9UQ53 548 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms