RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 GSTM3P21266 225 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 GPR85P60893 370 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 NXPE4Q6UWF7 544 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 PAMR1Q6UXH9 720 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 TECPR1Q7Z6L1 1165 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 C4orf32Q8N8J7 132 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 BHLHE23Q8NDY6 225 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 SLC7A7Q9UM01 511 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 AQP7O14520 342 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF674Q2M3X9 581 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 PSAPL1Q6NUJ1 521 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 SDR9C7Q8NEX9 313 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 OR5H2Q8NGV7 314 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 SLC6A18Q96N87 628 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 ANKRD27Q96NW4 1050 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 DPH1Q9BZG8 443 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 NAV1Q8NEY1 1877 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 PRAMEF2O60811 474 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 EGFP01133 1207 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 GCGRP47871 477 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 VMACQ2NL98 169 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 KRBOX4Q5JUW0 171 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 ENPP6Q6UWR7 440 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 CLECL1Q8IZS7 167 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 SMG8Q8ND04 991 aaKnown RBP7.97□□□□□ -1.13
SCN9A-203ENST00000409672 URM1Q9BTM9 101 aaKnown RBP7.97□□□□□ -1.13
SCN9A-203ENST00000409672 DCSTAMPQ9H295 470 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 OARD1Q9Y530 152 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 HOXC5Q00444 222 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF454Q8N9F8 522 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 OR52R1Q8NGF1 315 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 CNIH3Q8TBE1 160 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF431Q8TF32 576 aaPredicted RBP7.97□□□□□ -1.13
SCN9A-203ENST00000409672 SLC35F5Q8WV83 523 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 SLC22A4Q9H015 551 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 RAB21Q9UL25 225 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 SCN2AQ99250 2005 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF254O75437 659 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 ANXA8P13928 327 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 RFC3P40938 356 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 AQP2P41181 271 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 WDR5P61964 334 aaKnown RBP7.97□□□□□ -1.13
SCN9A-203ENST00000409672 NEIL3Q8TAT5 605 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 STK35Q8TDR2 534 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 TXNDC15Q96J42 360 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 ATP23Q9Y6H3 246 aa7.97□□□□□ -1.13
SCN9A-203ENST00000409672 FAM166BA8MTA8 275 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 LRRTM2O43300 516 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 HNRNPA1P09651 372 aaKnown RBP eCLIP7.96□□□□□ -1.13
SCN9A-203ENST00000409672 PSMB5P28074 263 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 CDKN2DP55273 166 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 KCNC3Q14003 757 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 OR9A4Q8NGU2 314 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 RSPRY1Q96DX4 576 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 EXTL2Q9UBQ6 330 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 A0A0G2JMP0 313 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 PRSS38A1L453 326 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 MPIG6BO95866 241 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 MAPK3P27361 379 aaPredicted RBP7.96□□□□□ -1.13
SCN9A-203ENST00000409672 RRAS2P62070 204 aaPredicted RBP7.96□□□□□ -1.13
SCN9A-203ENST00000409672 SLC36A3Q495N2 470 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 LCN10Q6JVE6 187 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 NIPAL3Q6P499 406 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 ZADH2Q8N4Q0 377 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 OR4M2Q8NGB6 313 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 NGBQ9NPG2 151 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 LRFN1Q9P244 771 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.96□□□□□ -1.13
SCN9A-203ENST00000409672 ST14Q9Y5Y6 855 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 TTC3P53804 2025 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 SRRM3A6NNA2 597 aaPredicted RBP7.96□□□□□ -1.13
SCN9A-203ENST00000409672 UGDHO60701 494 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 FMO6PO60774 539 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 SOCS5O75159 536 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 LYPLA2O95372 231 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 MYF5P13349 255 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 PYCR1P32322 319 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 CD79BP40259 229 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 NPBWR1P48145 328 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 PTH2RP49190 550 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 ABHD18Q0P651 414 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 HEPHL1Q6MZM0 1159 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 ABHD12BQ7Z5M8 362 aaPredicted RBP7.96□□□□□ -1.13
SCN9A-203ENST00000409672 OR1S1Q8NH92 325 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 NFS1Q9Y697 457 aa7.96□□□□□ -1.13
SCN9A-203ENST00000409672 FAM163BP0C2L3 166 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 PSMB10P40306 273 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 MELKQ14680 651 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ASTE1Q2TB18 679 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 KHDC1Q4VXA5 237 aaKnown RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 LRRN1Q6UXK5 716 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 FITM2Q8N6M3 262 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 EDAQ92838 391 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF689Q96CS4 500 aaPredicted RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 MAPKAP1Q9BPZ7 522 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 DHCR7Q9UBM7 475 aaKnown RBP7.96□□□□□ -1.14
SCN9A-203ENST00000409672 POMPQ9Y244 141 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 PEX16Q9Y5Y5 336 aa7.96□□□□□ -1.14
SCN9A-203ENST00000409672 EBLN1P0CF75 366 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms