RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 THBS1P07996 1170 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 LTA4HP09960 611 aaKnown RBP14.91□□□□□ -0.02
CHMP3-203ENST00000409225 SSTR1P30872 391 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 EVI2BP34910 448 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 GP5P40197 560 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 EIF1AXP47813 144 aaKnown RBP14.91□□□□□ -0.02
CHMP3-203ENST00000409225 ALDH9A1P49189 494 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 PNLIPRP2P54317 469 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 GANABQ14697 944 aaKnown RBP14.91□□□□□ -0.02
CHMP3-203ENST00000409225 TMEM249Q2WGJ8 235 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 ZNF672Q499Z4 452 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-203ENST00000409225 NCMAPQ5T1S8 102 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 ZNF619Q8N2I2 560 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 OR4N2Q8NGD1 307 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 S100PBPQ96BU1 408 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 NXNL1Q96CM4 212 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 TRIM31Q9BZY9 425 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 OR10A4Q9H209 315 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 BARX1Q9HBU1 254 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-203ENST00000409225 ZBTB26Q9HCK0 441 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 ZNF780BQ9Y6R6 833 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 SHISA8B8ZZ34 492 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 EIF1AYO14602 144 aaKnown RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 SEC31AO94979 1220 aaKnown RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 CLDN9O95484 217 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 PSMB1P20618 241 aaKnown RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 MRPS22P82650 360 aaKnown RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 TSC22D1Q15714 1073 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 PGGHGQ32M88 737 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 ZNF628Q5EBL2 1059 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 LGSNQ5TDP6 509 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 TTC19Q6DKK2 380 aaPredicted RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 COMMD6Q7Z4G1 85 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 ATG4DQ86TL0 474 aaPredicted RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 STK32CQ86UX6 486 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 SLC44A2Q8IWA5 706 aaPredicted RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 KLHL7Q8IXQ5 586 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 METTL4Q8N3J2 472 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 KBTBD8Q8NFY9 601 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 KAT2AQ92830 837 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 TM4SF18Q96CE8 201 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 CNRIP1Q96F85 164 aaPredicted RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 VSTM2LQ96N03 204 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 SHARPINQ9H0F6 387 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 ALG2Q9H553 416 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 ESRP2Q9H6T0 727 aaKnown RBP14.9□□□□□ -0.02
CHMP3-203ENST00000409225 C12orf49Q9H741 205 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 PTGES2Q9H7Z7 377 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 WHRNQ9P202 907 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 LPAR3Q9UBY5 353 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 PSME2Q9UL46 239 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 PPP2R2CQ9Y2T4 447 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 ACOT9Q9Y305 439 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 AP4B1Q9Y6B7 739 aa14.9□□□□□ -0.02
CHMP3-203ENST00000409225 A0A096LNT2 108 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 FAM234BA2RU67 622 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 TP73O15350 636 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 GMFGO60234 142 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 BCAS2O75934 225 aaPredicted RBP14.89□□□□□ -0.03
CHMP3-203ENST00000409225 SIX3O95343 332 aaPredicted RBP14.89□□□□□ -0.03
CHMP3-203ENST00000409225 IL11P20809 199 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 SPRP35270 261 aaPredicted RBP14.89□□□□□ -0.03
CHMP3-203ENST00000409225 CASP9P55211 416 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.89□□□□□ -0.03
CHMP3-203ENST00000409225 ERCC6LQ2NKX8 1250 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 SGO1Q5FBB7 561 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 FRG2Q64ET8 278 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 GGNQ86UU5 652 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 CTAGE3PQ8IX95 158 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 CCDC116Q8IYX3 515 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 STEAP2Q8NFT2 490 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 OR52B6Q8NGF0 335 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 UHMK1Q8TAS1 419 aaKnown RBP14.89□□□□□ -0.03
CHMP3-203ENST00000409225 TRPC4APQ8TEL6 797 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 PYROXD1Q8WU10 500 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 KCTD4Q8WVF5 259 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 ATP6V1E2Q96A05 226 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 C1GALT1C1Q96EU7 318 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 C11orf24Q96F05 449 aaPredicted RBP14.89□□□□□ -0.03
CHMP3-203ENST00000409225 ZNF681Q96N22 645 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 FRG2BQ96QU4 278 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 TNFRSF13CQ96RJ3 184 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 TRAF4Q9BUZ4 470 aaPredicted RBP14.89□□□□□ -0.03
CHMP3-203ENST00000409225 NOL11Q9H8H0 719 aaKnown RBP14.89□□□□□ -0.03
CHMP3-203ENST00000409225 SAYSD1Q9NPB0 183 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 SDHAF3Q9NRP4 125 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 TMEM160Q9NX00 188 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 FLRT3Q9NZU0 649 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 OR10H1Q9Y4A9 318 aa14.89□□□□□ -0.03
CHMP3-203ENST00000409225 OR7A17O14581 309 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 CD8AP01732 235 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 CRABP2P29373 138 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 ALDH18A1P54886 795 aaKnown RBP14.88□□□□□ -0.03
CHMP3-203ENST00000409225 IRF9Q00978 393 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 DR1Q01658 176 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 SH2D4BQ5SQS7 431 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 GAS2L3Q86XJ1 694 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 OR9A2Q8NGT5 310 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 OR10D3Q8NH80 312 aa14.88□□□□□ -0.03
CHMP3-203ENST00000409225 ZNF675Q8TD23 568 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms