RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 LMF2Q9BU23 707 aaKnown RBP17.64■□□□□ 0.42
USP39-202ENST00000409025 FOLH1BQ9HBA9 442 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 CAPN10Q9HC96 672 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 CCNB1IP1Q9NPC3 277 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 POLE3Q9NRF9 147 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 REV1Q9UBZ9 1251 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 TNRC6BQ9UPQ9 1833 aaKnown RBP17.64■□□□□ 0.42
USP39-202ENST00000409025 A0A1B0GTQ1 180 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 CPSF4LA6NMK7 179 aaKnown RBP17.64■□□□□ 0.41
USP39-202ENST00000409025 ZAR1LA6NP61 321 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 A8MU76 341 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 H3BMH7 237 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 KIAA0513O60268 411 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 CYP7B1O75881 506 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 MAOAP21397 527 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 RPS4Y1P22090 263 aaKnown RBP17.64■□□□□ 0.41
USP39-202ENST00000409025 POU1F1P28069 291 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 CSTF1Q05048 431 aaKnown RBP17.64■□□□□ 0.41
USP39-202ENST00000409025 ST3GAL3Q11203 375 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 BIKQ13323 160 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 ILKQ13418 452 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 TRAM2Q15035 370 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 PLK5Q496M5 336 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 IPCEF1Q8WWN9 437 aaPredicted RBP17.64■□□□□ 0.41
USP39-202ENST00000409025 PIGKQ92643 395 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 MVB12AQ96EY5 273 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 ZNF578Q96N58 590 aaPredicted RBP17.64■□□□□ 0.41
USP39-202ENST00000409025 PELOQ9BRX2 385 aaKnown RBP17.64■□□□□ 0.41
USP39-202ENST00000409025 PRR14Q9BWN1 585 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 POLR2J3Q9H1A7 115 aaKnown RBP17.64■□□□□ 0.41
USP39-202ENST00000409025 ERVK-18Q9QC07 812 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 NDOR1Q9UHB4 597 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 CLDN16Q9Y5I7 305 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 MAU2Q9Y6X3 613 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 SPTBP11277 2137 aa17.64■□□□□ 0.41
USP39-202ENST00000409025 GXYLT2A0PJZ3 443 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 MRPS14O60783 128 aaKnown RBP17.63■□□□□ 0.41
USP39-202ENST00000409025 ALAS2P22557 587 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 SH3BGRP55822 239 aaPredicted RBP17.63■□□□□ 0.41
USP39-202ENST00000409025 EEF1A1P68104 462 aaKnown RBP17.63■□□□□ 0.41
USP39-202ENST00000409025 TEKQ02763 1124 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 TUBA3CQ13748 450 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 SERTAD2Q14140 314 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 ZNF267Q14586 743 aaPredicted RBP17.63■□□□□ 0.41
USP39-202ENST00000409025 FIGNL1Q6PIW4 674 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 PLEKHM3Q6ZWE6 761 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 KANSL1Q7Z3B3 1105 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 GPR135Q8IZ08 494 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 ALDH16A1Q8IZ83 802 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 MORN4Q8NDC4 146 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 OR1L3Q8NH93 324 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 DIO2Q92813 273 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 CNDP2Q96KP4 475 aaKnown RBP17.63■□□□□ 0.41
USP39-202ENST00000409025 MCHR1Q99705 422 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 YIPF2Q9BWQ6 316 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 ANKRD19PQ9H560 264 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 FBXO34Q9NWN3 711 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 HEMK1Q9Y5R4 338 aaPredicted RBP17.63■□□□□ 0.41
USP39-202ENST00000409025 SDK1Q7Z5N4 2213 aa17.63■□□□□ 0.41
USP39-202ENST00000409025 ZNF701M0R085 212 aaPredicted RBP17.62■□□□□ 0.41
USP39-202ENST00000409025 BRINP1O60477 761 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 IFNA16P05015 189 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 PNLIPP16233 465 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 SSTR4P31391 388 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 PEX19P40855 299 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 EMDP50402 254 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 COX10Q12887 443 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 NR0B2Q15466 257 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 ENTPD8Q5MY95 495 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 NLGN4XQ8N0W4 816 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 OR13F1Q8NGS4 319 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 EDAQ92838 391 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 NDC1Q9BTX1 674 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 SEMA4GQ9NTN9 838 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 ZNF226Q9NYT6 803 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 SERTAD3Q9UJW9 196 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 GMEB2Q9UKD1 530 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 CDC14AQ9UNH5 594 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 PCDHGB1Q9Y5G3 927 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 OR2W5A6NFC9 320 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 CLDN24A6NM45 220 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 RGS10O43665 173 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 MPZL2O60487 215 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 PRAMEF2O60811 474 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 NID1P14543 1247 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 FOLR1P15328 257 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 GALNSP34059 522 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 TRHRP34981 398 aaPredicted RBP17.62■□□□□ 0.41
USP39-202ENST00000409025 IFNGR2P38484 337 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 PSG6Q00889 435 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 MAPK14Q16539 360 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 TMEM236Q5W0B7 351 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 C1orf94Q6P1W5 598 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 CD300LDQ6UXZ3 194 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 OR4C6Q8NH72 309 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 ZNF420Q8TAQ5 688 aaPredicted RBP17.62■□□□□ 0.41
USP39-202ENST00000409025 SAP25Q8TEE9 199 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 ISOC1Q96CN7 298 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 CNPPD1Q9BV87 410 aa17.62■□□□□ 0.41
USP39-202ENST00000409025 ARMC7Q9H6L4 198 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms