RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 HOXA1P49639 335 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 STARP49675 285 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 SKP1P63208 163 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 ID2Q02363 134 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 OC90Q02509 493 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 IRF8Q02556 426 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 PFKFB4Q16877 469 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 ZBED5Q49AG3 693 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 CDKL4Q5MAI5 379 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 C1orf146Q5VVC0 180 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 CGB2Q6NT52 195 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 SHQ1Q6PI26 577 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 LRRC70Q7Z2Q7 622 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 MAMDC2Q7Z304 686 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 RPS19BP1Q86WX3 136 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 SLC5A8Q8N695 610 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 VANGL1Q8TAA9 524 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 RAB3IL1Q8TBN0 382 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 LRRC20Q8TCA0 184 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 UBTD2Q8WUN7 234 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 SCMH1Q96GD3 660 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 MAPKAP1Q9BPZ7 522 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 UTP23Q9BRU9 249 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 EFCAB11Q9BUY7 163 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 PRR14Q9BWN1 585 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 MS4A8Q9BY19 250 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 NMRAL1Q9HBL8 299 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 PNO1Q9NRX1 252 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 NPAP1Q9NZP6 1156 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 KCMF1Q9P0J7 381 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 SH3BGRL2Q9UJC5 107 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 TINAGQ9UJW2 476 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 AP4S1Q9Y587 144 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 PDZD2O15018 2839 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 A0A096LPK6 155 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 EFCAB10A6NFE3 127 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 TMEM200CA6NKL6 621 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 GNB5O14775 395 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 B3GALT2O43825 422 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 LDB3O75112 727 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 PRKRAO75569 313 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 DDAH2O95865 285 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 TGFB1P01137 390 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 APOC1P02654 83 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 KRT8P05787 483 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 STSP08842 583 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 SERPINB5P36952 375 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 GPR143P51810 404 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 BMXP51813 675 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 NR0B1P51843 470 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 RAB38P57729 211 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 MLF1P58340 268 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 SLC13A2Q13183 592 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ITGADQ13349 1161 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 NAB1Q13506 487 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 DDX39BQ13838 428 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 TBCCQ15814 346 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 RNFT1Q5M7Z0 435 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 TRIM40Q6P9F5 258 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 GFRALQ6UXV0 394 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 GALNTL5Q7Z4T8 443 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 JAZF1Q86VZ6 243 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 SRRM1Q8IYB3 904 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 OR7G3Q8NG95 312 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 SUN3Q8TAQ9 357 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 JADE3Q92613 823 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 FRMD6Q96NE9 622 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 WDR12Q9GZL7 423 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ACSS3Q9H6R3 686 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 PRTFDC1Q9NRG1 225 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ACTR3BQ9P1U1 418 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 LRFN1Q9P244 771 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ABI3Q9P2A4 366 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 OPTCQ9UBM4 332 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 DAPP1Q9UN19 280 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ACOT9Q9Y305 439 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 CAB39Q9Y376 341 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 TESMINQ9Y4I5 508 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 POLQO75417 2590 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 A0A0A6YYJ9 748 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 WASHC1A8K0Z3 465 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 SLCO1B7G3V0H7 640 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 AKAP10O43572 662 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ETHE1O95571 254 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ATP5A1P25705 553 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 RFC3P40938 356 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 PIK3CGP48736 1102 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ARHGDIAP52565 204 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 HSF1Q00613 529 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ILF2Q12905 390 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 GTDC1Q4AE62 458 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 CYP20A1Q6UW02 462 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 RPS27LQ71UM5 84 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 SPATC1Q76KD6 591 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 MDGA2Q7Z553 956 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 ZER1Q7Z7L7 766 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 OR4N5Q8IXE1 308 aa8.97□□□□□ -0.97
NIF3L1-202ENST00000409020 LAS2Q8IYD9 372 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms