RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PPP1R14CQ8TAE6 165 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 AENQ8WTP8 325 aaKnown RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 TWIST2Q8WVJ9 160 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 RNASE6Q93091 150 aaKnown RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 EFHD2Q96C19 240 aaPredicted RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 ELP4Q96EB1 424 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 WDYHV1Q96HA8 205 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 FCRL1Q96LA6 429 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 MS4A4EQ96PG1 132 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 PRPF18Q99633 342 aaKnown RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 LMF2Q9BU23 707 aaKnown RBP8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 TMEM109Q9BVC6 243 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 SFXN3Q9BWM7 321 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 TBL1XR1Q9BZK7 514 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 UCK2Q9BZX2 261 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 GALNT9Q9HCQ5 603 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 FIS1Q9Y3D6 152 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 TRAF6Q9Y4K3 522 aa8.27□□□□□ -1.09
SNORD88A-201ENST00000408314 UPK1AO00322 258 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 SYT5O00445 386 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 LSM1O15116 133 aaKnown RBP8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 SCO2O43819 266 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 MYZAPP0CAP1 466 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 PEPDP12955 493 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 SDC1P18827 310 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 BMP5P22003 454 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 CTSSP25774 331 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 DPP4P27487 766 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 ALDH3A1P30838 453 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 SOX18P35713 384 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 KIR2DL3P43628 341 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 PRIM2P49643 509 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 DGKQP52824 942 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 DIO3P55073 304 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 SORDQ00796 357 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 HSPB3Q12988 150 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 FGFBP1Q14512 234 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 KIAA0040Q15053 153 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 KRT71Q3SY84 523 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 GALNTL6Q49A17 601 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 ARL13AQ5H913 290 aaPredicted RBP8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 OR2A2Q6IF42 318 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 SZRD1Q7Z422 152 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 MISPQ8IVT2 679 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 WDSUB1Q8N9V3 476 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 SIMC1Q8NDZ2 872 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 OR6Y1Q8NGX8 325 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 TCP10LQ8TDR4 215 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 FAM222BQ8WU58 562 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 RNF138Q8WVD3 245 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 WNT2BQ93097 391 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 ZIM3Q96PE6 472 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 TSSK3Q96PN8 268 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 PIGMQ9H3S5 423 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 NEUROD4Q9HD90 331 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 SH3BP4Q9P0V3 963 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 CCL27Q9Y4X3 112 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 DNAJC15Q9Y5T4 150 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 ANKRD17O75179 2603 aaKnown RBP8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 ARHGAP21Q5T5U3 1957 aa8.26□□□□□ -1.09
SNORD88A-201ENST00000408314 HCFC1P51610 2035 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 PIP5K1BO14986 540 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 SCAMP2O15127 329 aaKnown RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 RGS16O15492 202 aaPredicted RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 CTIFO43310 598 aaKnown RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 EMC8O43402 210 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 CRHP06850 196 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 NGFRP08138 427 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 LINC00032P0C843 101 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 TMIGD3P0DMS9 266 aaPredicted RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 FCGR2AP12318 317 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 HPGDP15428 266 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF708P17019 499 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 POU3F2P20265 443 aaPredicted RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 FRKP42685 505 aaPredicted RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 CPA2P48052 419 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 RFX3P48380 749 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 SERPINB4P48594 390 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 GFRA1P56159 465 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 RPS3AP61247 264 aaKnown RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 C17orf67Q0P5P2 114 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 PDE7AQ13946 482 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 MLC1Q15049 377 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 LSM12Q3MHD2 195 aaKnown RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 GLYR1Q49A26 553 aaPredicted RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 FLYWCH1Q4VC44 716 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 RFTN2Q52LD8 501 aaPredicted RBP8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 RAET1LQ5VY80 246 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 BHLHB9Q6PI77 547 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 Q6ZSR9 355 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 P4HA3Q7Z4N8 544 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 GRAMD2AQ8IUY3 354 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 TRIM42Q8IWZ5 723 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 TNIP2Q8NFZ5 429 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 OR2W6PQ8NHA6 318 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 GPR151Q8TDV0 419 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 MOAP1Q96BY2 351 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 EGLN2Q96KS0 407 aa8.25□□□□□ -1.09
SNORD88A-201ENST00000408314 PIGQQ9BRB3 760 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms