RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SLC13A4Q9UKG4 626 aa12.08□□□□□ -0.48
SMARCB1-203ENST00000407082 RNF6Q9Y252 685 aa12.08□□□□□ -0.48
SMARCB1-203ENST00000407082 B3GNT3Q9Y2A9 372 aa12.08□□□□□ -0.48
SMARCB1-203ENST00000407082 GPC6Q9Y625 555 aaPredicted RBP12.08□□□□□ -0.48
SMARCB1-203ENST00000407082 NBASA2RRP1 2371 aa12.08□□□□□ -0.48
SMARCB1-203ENST00000407082 BOD1L1Q8NFC6 3051 aa12.08□□□□□ -0.48
SMARCB1-203ENST00000407082 CREBBPQ92793 2442 aa12.08□□□□□ -0.48
SMARCB1-203ENST00000407082 HMGN4O00479 90 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 PLD2O14939 933 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 BCAS1O75363 584 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 SOX30O94993 753 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 TBX6O95947 436 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 C1QCP02747 245 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 MT-ND2P03891 347 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 CDK1P06493 297 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 OSMP13725 252 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 PNLIPP16233 465 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 CD247P20963 164 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 ATP5A1P25705 553 aaKnown RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 ALDH4A1P30038 563 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 BCL6P41182 706 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 BUD31P41223 144 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 GPR3P46089 330 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 GP2P55259 537 aaKnown RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 RP1P56715 2156 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 RELAQ04206 551 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 GPR18Q14330 331 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 TIMM50Q3ZCQ8 353 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 HIST2H2BCQ6DN03 193 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 MRM1Q6IN84 353 aaKnown RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 C16orf87Q6PH81 154 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 RAB11FIP2Q7L804 512 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 ZNF761Q86XN6 746 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 Q8N9G6 341 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 ACOT4Q8N9L9 421 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 OR52J3Q8NH60 311 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 NT5CQ8TCD5 201 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 UTP15Q8TED0 518 aaKnown RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 XAGE5Q8WWM1 108 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 SLC38A4Q969I6 547 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 CCDC74AQ96AQ1 378 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 VMP1Q96GC9 406 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 DHRS1Q96LJ7 313 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 SLC38A3Q99624 504 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 C17orf62Q9BQA9 187 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 PINK1Q9BXM7 581 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 OR51I1Q9H343 314 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 LHX9Q9NQ69 397 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 PRDM7Q9NQW5 492 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 RASSF1Q9NS23 344 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 TBCCD1Q9NVR7 557 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 MS4A12Q9NXJ0 267 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 ETAA1Q9NY74 926 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 PISDQ9UG56 409 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 ASB4Q9Y574 426 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 SPACA6W5XKT8 324 aa12.07□□□□□ -0.48
SMARCB1-203ENST00000407082 IRGMA1A4Y4 181 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 BLACEA4D250 179 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 SNTNA6NMZ2 147 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 SYT5O00445 386 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 HAT1O14929 419 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 WBP4O75554 376 aaKnown RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 UGT2B17O75795 530 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 SLITRK5O94991 958 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 INMTO95050 263 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 CHRM5P08912 532 aaPredicted RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 SLC35G6P0C7Q6 338 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 JMJD7P0C870 316 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 ZNF182P17025 639 aaPredicted RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 GSTM3P21266 225 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 ACVR2AP27037 513 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 UGT2B10P36537 528 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 IDH2P48735 452 aaKnown RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 OR1D5P58170 312 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 ALDH6A1Q02252 535 aaKnown RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 PRSS53Q2L4Q9 553 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 MEDAGQ5VYS4 303 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 FRMPD2BQ6IN97 320 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 ZNF425Q6IV72 752 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 SLC48A1Q6P1K1 146 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 AHSA2Q719I0 299 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 ZNF438Q7Z4V0 828 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 TSEN54Q7Z6J9 526 aaKnown RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 ADCK1Q86TW2 530 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 ASPGQ86U10 573 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 PLD3Q8IV08 490 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 DNAJC22Q8N4W6 341 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 SMYD1Q8NB12 490 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 AQP11Q8NBQ7 271 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 CAMKVQ8NCB2 501 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 CCDC3Q9BQI4 270 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 FNDC11Q9BVV2 318 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 TEX12Q9BXU0 123 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 PRRG3Q9BZD7 231 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 NAA50Q9GZZ1 169 aaKnown RBP12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 SRMSQ9H3Y6 488 aa12.06□□□□□ -0.48
SMARCB1-203ENST00000407082 XKR8Q9H6D3 395 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms