RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MRPS18CQ9Y3D5 142 aaKnown RBP4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 SPEF2Q9C093 1822 aa4.04□□□□□ -1.76
HMGB3P18-201ENST00000406327 SYNJ2BP-COX16A0A087WUM0 186 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 NPIPA5A0A0B4J1W7 369 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 ERICH2A1L162 156 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 PRSS44E7EML9 344 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 NPIPA5E9PKD4 350 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 NEDD8-MDP1E9PL57 170 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 H0YCG3 227 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 MCF2LO15068 1137 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 RANBP6O60518 1105 aaKnown RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 RHOBTB1O94844 696 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 ANP32DO95626 131 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 APBB3O95704 486 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 EPB41P11171 864 aaKnown RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 PRG2P13727 222 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 AOC1P19801 751 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 PAICSP22234 425 aaKnown RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 U2AF2P26368 475 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 CALML3P27482 149 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 PDHA2P29803 388 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 TRA2BP62995 288 aaKnown RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 NOP14P78316 857 aaKnown RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 SRYQ05066 204 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 FUT7Q11130 342 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 MTF1Q14872 753 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 SLC17A1Q14916 467 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 STK38Q15208 465 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 MLF2Q15773 248 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 ADPRMQ3LIE5 342 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 DCAF4L1Q3SXM0 396 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 LRIT3Q3SXY7 679 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 LRRC23Q53EV4 343 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF311Q5JNZ3 666 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 ATAD3BQ5T9A4 648 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 NR2C2APQ86WQ0 139 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 STKLD1Q8NE28 680 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF397Q8NF99 534 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 ZNF519Q8TB69 540 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 HCAR2Q8TDS4 363 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 ESR2Q92731 530 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 CAPNS2Q96L46 248 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 NSMCE3Q96MG7 304 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 NAP1L5Q96NT1 182 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 VPS35Q96QK1 796 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 LGMNQ99538 433 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 CRACR2AQ9BSW2 395 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 RBM24Q9BX46 236 aaKnown RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 CXXC4Q9H2H0 198 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 PLEKHA3Q9HB20 300 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 FGF22Q9HCT0 170 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 PLCXD1Q9NUJ7 323 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 GDAP2Q9NXN4 497 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 EIF3KQ9UBQ5 218 aaKnown RBP4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 SNX6Q9UNH7 406 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 FKBP7Q9Y680 259 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 PLCH1Q4KWH8 1693 aa4.03□□□□□ -1.76
HMGB3P18-201ENST00000406327 LRP5O75197 1615 aa4.03□□□□□ -1.77
HMGB3P18-201ENST00000406327 NID2Q14112 1375 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 AFDNP55196 1824 aaKnown RBP4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 A0A0U1RQV5 110 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 A0A1B0GVL5 298 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 GPR89AB7ZAQ6 455 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 WASH3PC4AMC7 463 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 DEXIO95424 95 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 CALCAP01258 141 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 CA3P07451 260 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 GPR89BP0CG08 455 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 ADORA3P0DMS8 318 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 OTX2P32243 289 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 RFC4P35249 363 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 ADRA1AP35348 466 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 MTIF2P46199 727 aaKnown RBP4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 NDUFA8P51970 172 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 TMEM50BP56557 158 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 DYNLL1P63167 89 aaKnown RBP4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 MECOMQ03112 1051 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 BNIP1Q12981 228 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 ENPP2Q13822 863 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 FAM189A2Q15884 450 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 SLC36A3Q495N2 470 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 SBK1Q52WX2 424 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 AGAP7PQ5VUJ5 663 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 NEPROQ6NW34 567 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 NIPAL3Q6P499 406 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 BHLHB9Q6PI77 547 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRIM65Q6PJ69 517 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 WASH2PQ6VEQ5 465 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 CENPUQ71F23 418 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 ARMCX2Q7L311 632 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 PLA2G4DQ86XP0 818 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 CENPSQ8N2Z9 138 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 METTL4Q8N3J2 472 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 C9orf106Q8NAJ2 232 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 BEST4Q8NFU0 473 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 OR52B6Q8NGF0 335 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 OR1K1Q8NGR3 316 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 SDR42E1Q8WUS8 393 aa4.02□□□□□ -1.77
HMGB3P18-201ENST00000406327 PIBF1Q8WXW3 757 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms