RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATP12AP54707 1039 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 VCPP55072 806 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 PEX3P56589 373 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 GSCP56915 257 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 HAND2P61296 217 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF85Q03923 595 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 GBE1Q04446 702 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 PJVKQ0ZLH3 352 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 DDX39BQ13838 428 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 FASTKQ14296 549 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 EMC2Q15006 297 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 MTHFSDQ2M296 383 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 BEND6Q5SZJ8 279 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 LCLAT1Q6UWP7 414 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 DPY19L4Q7Z388 723 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 KCNMB4Q86W47 210 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF683Q8IZ20 524 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 FAM184AQ8NB25 1140 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 NUP37Q8NFH4 326 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 C11orf45Q8TAV5 145 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF519Q8TB69 540 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 NABP1Q96AH0 204 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 BIRC7Q96CA5 298 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 NTNG2Q96CW9 530 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 DHTKD1Q96HY7 919 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 RBM14Q96PK6 669 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 TNFRSF13CQ96RJ3 184 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 OMDQ99983 421 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 RPP25Q9BUL9 199 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 GFRA4Q9GZZ7 299 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 PARLQ9H300 379 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 TMEM165Q9HC07 324 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 DCAF13Q9NV06 445 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 QPCTLQ9NXS2 382 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 BARX2Q9UMQ3 279 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 EIF3LQ9Y262 564 aaKnown RBP4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 DHRS7Q9Y394 339 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 NAALAD2Q9Y3Q0 740 aa4.07□□□□□ -1.76
HMGB1P13-201ENST00000406019 A0A0J9YVX5 310 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 XKRY2A2RUG3 117 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 IGLON5A6NGN9 336 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 K7EQG2 157 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 M0QX08 132 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 HOXB7P09629 217 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 CD1DP15813 335 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 UCP1P25874 307 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 AIF1P55008 147 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 IL9RQ01113 521 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 ECSCRQ19T08 205 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 WLSQ5T9L3 541 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 PNCKQ6P2M8 343 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 ARHGAP11AQ6P4F7 1023 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 NUFIP2Q7Z417 695 aaKnown RBP4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 ANKRD37Q7Z713 158 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF781Q8N8C0 355 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 TRMT10AQ8TBZ6 339 aaKnown RBP4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 SUN5Q8TC36 379 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 SLC30A2Q9BRI3 323 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 CAPS2Q9BXY5 557 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 DGCR6LQ9BY27 220 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 SLC25A51Q9H1U9 297 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 RHOJQ9H4E5 214 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 ELOVL3Q9HB03 270 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 SPHK2Q9NRA0 654 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 DUS2Q9NX74 493 aaKnown RBP4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 UBAP1Q9NZ09 502 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 EIF3KQ9UBQ5 218 aaKnown RBP4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 CIDEBQ9UHD4 219 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 CLEC4AQ9UMR7 237 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 EXOGQ9Y2C4 368 aaKnown RBP4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 SLC9A8Q9Y2E8 581 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 EXOSC1Q9Y3B2 195 aaKnown RBP4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 SLCO1B1Q9Y6L6 691 aa4.06□□□□□ -1.76
HMGB1P13-201ENST00000406019 BCLAF3A2AJT9 711 aaKnown RBP4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 RNF212BA8MTL3 300 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ARHGEF33A8MVX0 844 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 H0YHG0 523 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 BTN3A3O00478 584 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ARPC3O15145 178 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 B3GAT3O94766 335 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF44P15621 663 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZNF26P17031 533 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 TPSB2P20231 275 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 CALB2P22676 271 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 SARNPP82979 210 aaKnown RBP4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 CSTF1Q05048 431 aaKnown RBP4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZMYND11Q15326 602 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 TPSAB1Q15661 275 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 SYPL1Q16563 259 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 FILIP1LQ4L180 1135 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 C14orf177Q52M58 125 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 CYBRD1Q53TN4 286 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 CELF3Q5SZQ8 465 aaKnown RBP4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 LINC00242Q5T6M2 205 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 PMF1Q6P1K2 205 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 BTNL3Q6UXE8 466 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ADAMTSL5Q6ZMM2 481 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 ZFAND4Q86XD8 727 aa4.05□□□□□ -1.76
HMGB1P13-201ENST00000406019 CCDC71Q8IV32 467 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms