RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 FGF17O60258 216 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 SNX4O95219 450 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 BMP2P12643 396 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 PEPDP12955 493 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 ELOAQ14241 798 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 TRIM16LQ309B1 348 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 ZCCHC12Q6PEW1 402 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 RAB11FIP2Q7L804 512 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 FGD2Q7Z6J4 655 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 OR2T33Q8NG76 320 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 IPCEF1Q8WWN9 437 aaPredicted RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 DGCR14Q96DF8 476 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 NEURL3Q96EH8 262 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 HS6ST2Q96MM7 605 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 IER2Q9BTL4 223 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 NRSN2Q9GZP1 204 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 OR10A5Q9H207 317 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 MARCH7Q9H992 704 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 LIN28AQ9H9Z2 209 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 LYRM4Q9HD34 91 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 B4GALT7Q9UBV7 327 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 ARHGAP33O14559 1287 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 NUDT21O43809 227 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 TRIM3O75382 744 aaPredicted RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 KCNK5O95279 499 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 NSA2O95478 260 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 IGHV4-34P06331 123 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 FUT4P22083 530 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 EPHA8P29322 1005 aaPredicted RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 BSGP35613 385 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 CRISP1P54107 249 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 KCNJ10P78508 379 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 E2F1Q01094 437 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 CBLBQ13191 982 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 GFOD2Q3B7J2 385 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 TRMT12Q53H54 448 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 OGFRL1Q5TC84 451 aaPredicted RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 MEX3DQ86XN8 651 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 CLEC1AQ8NC01 280 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 OR14A16Q8NHC5 309 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 CNIH3Q8TBE1 160 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 OR2A14Q96R47 310 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 ZNF559Q9BR84 538 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 HDHD2Q9H0R4 259 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 NMNAT1Q9HAN9 279 aaPredicted RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 CNIH4Q9P003 139 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 MMACHCQ9Y4U1 282 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 LRRC42Q9Y546 428 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 SLC22A7Q9Y694 548 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 H3BML4 177 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 ASNA1O43681 348 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 AKAP8O43823 692 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 EML2O95834 649 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 DLGAP3O95886 979 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 SOD1P00441 154 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 GPX2P18283 190 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 CNR2P34972 360 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 HSD17B7P56937 341 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 PPP1CAP62136 330 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 ARMCX4Q5H9R4 360 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 RBM48Q5RL73 367 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 PDSS1Q5T2R2 415 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 DNM1P34Q6PK57 102 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 IL20RBQ6UXL0 311 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 DLEU7Q6UYE1 221 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 CLIP4Q8N3C7 705 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 ADAMTS16Q8TE57 1224 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 GPN2Q9H9Y4 310 aaPredicted RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 PRDM9Q9NQV7 894 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 UBQLN4Q9NRR5 601 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 USP36Q9P275 1121 aaKnown RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 BTBD3Q9Y2F9 522 aa8.51□□□□□ -1.05
LIG4-202ENST00000405925 RPH3AQ9Y2J0 694 aaPredicted RBP8.51□□□□□ -1.05
LIG4-202ENST00000405925 UNC119BA6NIH7 251 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 SHISA7A6NL88 538 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 AIREO43918 545 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 CTSVO60911 334 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 ADAP00813 363 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 PDGFBP01127 241 aaPredicted RBP8.5□□□□□ -1.05
LIG4-202ENST00000405925 LINC00271P0C7V0 271 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 UBL4AP11441 157 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 ELK4P28324 431 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 EIF1AXP47813 144 aaKnown RBP8.5□□□□□ -1.05
LIG4-202ENST00000405925 PER3P56645 1201 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 MRPS15P82914 257 aaKnown RBP8.5□□□□□ -1.05
LIG4-202ENST00000405925 ARMC4Q5T2S8 1044 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
LIG4-202ENST00000405925 MFSD12Q6NUT3 480 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 SATL1Q86VE3 508 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 STT3BQ8TCJ2 826 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 TSEN15Q8WW01 171 aaKnown RBP8.5□□□□□ -1.05
LIG4-202ENST00000405925 RBP7Q96R05 134 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 NPLQ9BXD5 320 aaPredicted RBP8.5□□□□□ -1.05
LIG4-202ENST00000405925 TTTY10Q9BZA0 68 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 NEK6Q9HC98 313 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 SLC7A7Q9UM01 511 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 ABCG2Q9UNQ0 655 aa8.5□□□□□ -1.05
LIG4-202ENST00000405925 MAN2B2Q9Y2E5 1009 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms