RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 CASP12Q6UXS9 341 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 LRRC46Q96FV0 321 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 REEP4Q9H6H4 257 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 GALNT9Q9HCQ5 603 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 PLEKHB1Q9UF11 243 aaPredicted RBP15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 ANGPT4Q9Y264 503 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF197O14709 1029 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 PLA2G10O15496 165 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 ADAM12O43184 909 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 C6orf47O95873 294 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 CBR1P16152 277 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 TIA1P31483 386 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 TPRG1Q6ZUI0 275 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 GPR65Q8IYL9 337 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 OR11H4Q8NGC9 324 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 ALG14Q96F25 216 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 LYSMD1Q96S90 227 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 KLF16Q9BXK1 252 aaPredicted RBP15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 C14orf105Q9NVL8 296 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 NDOR1Q9UHB4 597 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 MAP4K5Q9Y4K4 846 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 VWA8A3KMH1 1905 aa15.26■□□□□ 0.03
COL4A3BP-204ENST00000405807 FAM221BA6H8Z2 402 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 TUBAL3A6NHL2 446 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 SRPRAP08240 638 aaKnown RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ATP1B2P14415 290 aaPredicted RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 SERPINA4P29622 427 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 CHI3L1P36222 383 aaPredicted RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 DGKEP52429 567 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 SEMG2Q02383 582 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 MPEG1Q2M385 716 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF385BQ569K4 471 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 DDX53Q86TM3 631 aaKnown RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 GLCCI1Q86VQ1 547 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 CXorf58Q96LI9 332 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 SOX7Q9BT81 388 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 GAREM1Q9H706 876 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 GHRLQ9UBU3 117 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 RFC3P40938 356 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 RAB4BP61018 213 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.25■□□□□ 0.034e-7■■■■■ 30.7
COL4A3BP-204ENST00000405807 MANEAQ5SRI9 462 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 USP30Q70CQ3 517 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZFP82Q8N141 532 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 OR8J1Q8NGP2 316 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 AP3S1Q92572 193 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 C14orf144Q96I85 54 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 MEGF10Q96KG7 1140 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 TSSK6Q9BXA6 273 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZFP64Q9NPA5 681 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 KCND3Q9UK17 655 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 FBXL21Q9UKT6 434 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 EXO1Q9UQ84 846 aaKnown RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 DMRT1Q9Y5R6 373 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 PROM1O43490 865 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 HRGP04196 525 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 GNSP15586 552 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 MUC1P15941 1255 aaPredicted RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 FEN1P39748 380 aaKnown RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ATP12AP54707 1039 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 PCBP3P57721 371 aaKnown RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 THEM4Q5T1C6 240 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 MZT2BQ6NZ67 158 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 SLC30A8Q8IWU4 369 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 C19orf18Q8NEA5 215 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 RNASE11Q8TAA1 199 aaKnown RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZC3H10Q96K80 434 aaKnown RBP15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ZIC5Q96T25 663 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 SEMA4CQ9C0C4 833 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 ANKRA2Q9H9E1 313 aa15.25■□□□□ 0.03
COL4A3BP-204ENST00000405807 TEX46H3BTG2 121 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 IGSF6O95976 241 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 PAICSP22234 425 aaKnown RBP15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 SNRPEP62304 92 aaKnown RBP15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 NAE1Q13564 534 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 TPGS2Q68CL5 300 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 C12orf73Q69YU5 71 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 C22orf42Q6IC83 251 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 RGS7BPQ6MZT1 257 aaPredicted RBP15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 GHDCQ8N2G8 530 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 BVESQ8NE79 360 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 HUS1BQ8NHY5 278 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 GLYATL2Q8WU03 294 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 SCRN2Q96FV2 425 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 MED8Q96G25 268 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 TMEM41AQ96HV5 264 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 KCTD7Q96MP8 289 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 HCN3Q9P1Z3 774 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 GULP1Q9UBP9 304 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 SLC6A5Q9Y345 797 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 CLCA3PQ9Y6N3 262 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 H3BN98 237 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 SIGLEC5O15389 551 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 HCN1O60741 890 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 GPR37L1O60883 481 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 LILRB5O75023 590 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 ASGR1P07306 291 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 ARAFP10398 606 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 ARSBP15848 533 aa15.24■□□□□ 0.03
COL4A3BP-204ENST00000405807 GNALP38405 381 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms